RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 CSADQ9Y600 493 aa9.7□□□□□ -0.86
PTPRK-212ENST00000434424 TRAV20A0A0B4J274 112 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 SYNJ1O43426 1573 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 SOGA1O94964 1423 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 RAPGEF3O95398 923 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 PMLP29590 882 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 CCNFP41002 786 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 ETF1P62495 437 aaKnown RBP9.69□□□□□ -0.86
PTPRK-212ENST00000434424 HP1BP3Q5SSJ5 553 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-212ENST00000434424 DNMBPQ6XZF7 1577 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 UBR7Q8N806 425 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 FAM13CQ8NE31 585 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-212ENST00000434424 EXOC2Q96KP1 924 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 APBA2Q99767 749 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 WNT10AQ9GZT5 417 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 GEMIN8Q9NWZ8 242 aaKnown RBP9.69□□□□□ -0.86
PTPRK-212ENST00000434424 MAPRE3Q9UPY8 281 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 THRAP3Q9Y2W1 955 aaKnown RBP9.69□□□□□ -0.86
PTPRK-212ENST00000434424 MRPS23Q9Y3D9 190 aaKnown RBP9.69□□□□□ -0.86
PTPRK-212ENST00000434424 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
PTPRK-212ENST00000434424 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 TRBV23-1A0A0A0MS06 115 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 KIAA1324LA8MWY0 1029 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-212ENST00000434424 FSCN2O14926 492 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 CD68P34810 354 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-212ENST00000434424 YARSP54577 528 aaKnown RBP9.68□□□□□ -0.86
PTPRK-212ENST00000434424 HSP90AA2PQ14568 343 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-212ENST00000434424 FAM209AQ5JX71 171 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 WWC2Q6AWC2 1192 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 RNF180Q86T96 592 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 WDR89Q96FK6 387 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-212ENST00000434424 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 LRP2BPQ9P2M1 347 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 MAGEC2Q9UBF1 373 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-212ENST00000434424 STOML1Q9UBI4 398 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 RIPOR2Q9Y4F9 1068 aa9.68□□□□□ -0.86
PTPRK-212ENST00000434424 SNAPC4Q5SXM2 1469 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 ANKRD34BA5PLL1 514 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 TPD52L2O43399 206 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 CTSBP07858 339 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 POLR2BP30876 1174 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 PMS1P54277 932 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 FAM50AQ14320 339 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 ZC3H12AQ5D1E8 599 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 ACAD11Q709F0 780 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 PHACTR4Q8IZ21 702 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 ATL2Q8NHH9 583 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 AARSD1Q9BTE6 412 aaKnown RBP9.67□□□□□ -0.86
PTPRK-212ENST00000434424 ARHGEF4Q9NR80 690 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 PICK1Q9NRD5 415 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 GABBR1Q9UBS5 961 aa9.67□□□□□ -0.86
PTPRK-212ENST00000434424 GSG1L2A8MUP6 293 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 ADAMTS4O75173 837 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 AKAP4Q5JQC9 854 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 SCUBE1Q8IWY4 988 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 FAM46AQ96IP4 442 aaKnown RBP9.66□□□□□ -0.86
PTPRK-212ENST00000434424 USP26Q9BXU7 913 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 MRPL4Q9BYD3 311 aaKnown RBP9.66□□□□□ -0.86
PTPRK-212ENST00000434424 HIF3AQ9Y2N7 669 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
PTPRK-212ENST00000434424 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
PTPRK-212ENST00000434424 GSC2O15499 205 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 DHX15O43143 795 aaKnown RBP9.65□□□□□ -0.86
PTPRK-212ENST00000434424 ADAM11O75078 769 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 CPEP16870 476 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 AXDND1Q5T1B0 1012 aaPredicted RBP9.65□□□□□ -0.86
PTPRK-212ENST00000434424 CNNM4Q6P4Q7 775 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 MCATQ8IVS2 390 aaKnown RBP9.65□□□□□ -0.86
PTPRK-212ENST00000434424 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 KLHL23Q8NBE8 558 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 SLC6A18Q96N87 628 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 CLUHP3Q96NS8 147 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 MYH16Q9H6N6 1097 aa9.65□□□□□ -0.86
PTPRK-212ENST00000434424 SUCOQ9UBS9 1254 aaKnown RBP9.65□□□□□ -0.86
PTPRK-212ENST00000434424 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
PTPRK-212ENST00000434424 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.87
PTPRK-212ENST00000434424 DNAJC25-GNG10A0A024R161 153 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 DDX3YO15523 660 aaKnown RBP9.64□□□□□ -0.87
PTPRK-212ENST00000434424 PRC1O43663 620 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 COBLO75128 1261 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 TP53P04637 393 aaPredicted RBP9.64□□□□□ -0.87
PTPRK-212ENST00000434424 TBX4P57082 545 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 HEATR6Q6AI08 1181 aaKnown RBP9.64□□□□□ -0.87
PTPRK-212ENST00000434424 SLFN12Q8IYM2 578 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 PPP1R14AQ96A00 147 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 KLHDC7BQ96G42 594 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 TMEM87BQ96K49 555 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 C8orf48Q96LL4 319 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 TARS2Q9BW92 718 aaKnown RBP9.64□□□□□ -0.87
PTPRK-212ENST00000434424 C7orf69Q9H7B7 122 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 INTS7Q9NVH2 962 aaKnown RBP9.64□□□□□ -0.87
PTPRK-212ENST00000434424 FAM86C1Q9NVL1 165 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 TJP2Q9UDY2 1190 aa9.64□□□□□ -0.87
PTPRK-212ENST00000434424 CLASP1Q7Z460 1538 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms