RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 FRRS1LQ9P0K9 344 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 MKL2Q9ULH7 1088 aa12.94□□□□□ -0.34
LINC01090-202ENST00000434418 TREHO43280 583 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 LILRB5O75023 590 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 AFF1P51825 1210 aaKnown RBP12.93□□□□□ -0.34
LINC01090-202ENST00000434418 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC01090-202ENST00000434418 GRIK5Q16478 980 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 KRT24Q2M2I5 525 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 ALKBH8Q96BT7 664 aaKnown RBP12.93□□□□□ -0.34
LINC01090-202ENST00000434418 HHIPQ96QV1 700 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 SUV39H2Q9H5I1 410 aa12.93□□□□□ -0.34
LINC01090-202ENST00000434418 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
LINC01090-202ENST00000434418 EIF1AYO14602 144 aaKnown RBP12.92□□□□□ -0.34
LINC01090-202ENST00000434418 NID1P14543 1247 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 DSC3Q14574 896 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 ADAMTSL4Q6UY14 1074 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 SPACA7Q96KW9 195 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 TRIM33Q9UPN9 1127 aa12.92□□□□□ -0.34
LINC01090-202ENST00000434418 ZNF541Q9H0D2 1346 aa12.91□□□□□ -0.34
LINC01090-202ENST00000434418 TCERG1O14776 1098 aaKnown RBP12.91□□□□□ -0.34
LINC01090-202ENST00000434418 NTSR2O95665 410 aa12.91□□□□□ -0.34
LINC01090-202ENST00000434418 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
LINC01090-202ENST00000434418 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
LINC01090-202ENST00000434418 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
LINC01090-202ENST00000434418 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
LINC01090-202ENST00000434418 RBSNQ9H1K0 784 aa12.91□□□□□ -0.34
LINC01090-202ENST00000434418 PRDM6Q9NQX0 595 aa12.91□□□□□ -0.34
LINC01090-202ENST00000434418 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
LINC01090-202ENST00000434418 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
LINC01090-202ENST00000434418 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
LINC01090-202ENST00000434418 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
LINC01090-202ENST00000434418 PEAR1Q5VY43 1037 aaPredicted RBP12.9□□□□□ -0.34
LINC01090-202ENST00000434418 BEND7Q8N7W2 519 aaPredicted RBP12.9□□□□□ -0.34
LINC01090-202ENST00000434418 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
LINC01090-202ENST00000434418 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
LINC01090-202ENST00000434418 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
LINC01090-202ENST00000434418 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
LINC01090-202ENST00000434418 COL4A5P29400 1685 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 RIC1Q4ADV7 1423 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 CPNE3O75131 537 aaKnown RBP12.89□□□□□ -0.35
LINC01090-202ENST00000434418 GDF6Q6KF10 455 aaPredicted RBP12.89□□□□□ -0.35
LINC01090-202ENST00000434418 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 SYNE4Q8N205 404 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 XAGE3Q8WTP9 111 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 LAMB2P55268 1798 aa12.89□□□□□ -0.35
LINC01090-202ENST00000434418 CHL1O00533 1208 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 GNB5O14775 395 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 IRS1P35568 1242 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
LINC01090-202ENST00000434418 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 CEP135Q66GS9 1140 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
LINC01090-202ENST00000434418 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 ZKSCAN3Q9BRR0 538 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 PBX4Q9BYU1 374 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
LINC01090-202ENST00000434418 DZANK1Q9NVP4 752 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 SCN4AP35499 1836 aa12.88□□□□□ -0.35
LINC01090-202ENST00000434418 EDN3P14138 238 aa12.87□□□□□ -0.35
LINC01090-202ENST00000434418 HOXA10P31260 410 aaPredicted RBP12.87□□□□□ -0.35
LINC01090-202ENST00000434418 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01090-202ENST00000434418 PARP10Q53GL7 1025 aa12.87□□□□□ -0.35
LINC01090-202ENST00000434418 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
LINC01090-202ENST00000434418 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
LINC01090-202ENST00000434418 PLVAPQ9BX97 442 aa12.87□□□□□ -0.35
LINC01090-202ENST00000434418 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
LINC01090-202ENST00000434418 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
LINC01090-202ENST00000434418 PNMA6FA0A0J9YX94 578 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 ANKRD33BA6NCL7 494 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 NEFLP07196 543 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 MAPK8P45983 427 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 PLCB3Q01970 1234 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 GALNT12Q8IXK2 581 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 TTC9Q92623 222 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 OSMRQ99650 979 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
LINC01090-202ENST00000434418 DDX21Q9NR30 783 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01090-202ENST00000434418 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
LINC01090-202ENST00000434418 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
LINC01090-202ENST00000434418 COL8A1P27658 744 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 EAPPQ56P03 285 aaPredicted RBP12.85□□□□□ -0.35
LINC01090-202ENST00000434418 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 PSMD1Q99460 953 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 POP1Q99575 1024 aaKnown RBP12.85□□□□□ -0.35
LINC01090-202ENST00000434418 ABCC4O15439 1325 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 TAF1P21675 1872 aa12.85□□□□□ -0.35
LINC01090-202ENST00000434418 FAM229AH3BQW9 127 aa12.84□□□□□ -0.35
LINC01090-202ENST00000434418 FZD9O00144 591 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms