RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 BMP3P12645 472 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 LACTBP83111 547 aaPredicted RBP18.22■□□□□ 0.51
TREX1-201ENST00000433541 COL13A1Q5TAT6 717 aaPredicted RBP18.22■□□□□ 0.51
TREX1-201ENST00000433541 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 STOX1Q6ZVD7 989 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 CYB5R4Q7L1T6 521 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 CTU1Q7Z7A3 348 aaKnown RBP18.22■□□□□ 0.51
TREX1-201ENST00000433541 GPRC5AQ8NFJ5 357 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 NKX2-3Q8TAU0 364 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 EFCC1Q9HA90 598 aa18.22■□□□□ 0.51
TREX1-201ENST00000433541 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
TREX1-201ENST00000433541 EIF5BO60841 1220 aaKnown RBP18.21■□□□□ 0.51
TREX1-201ENST00000433541 PSMC4P43686 418 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 FCGRTP55899 365 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 KRT32Q14532 448 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
TREX1-201ENST00000433541 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 RLFQ13129 1914 aa18.21■□□□□ 0.51
TREX1-201ENST00000433541 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 TNPO2O14787 897 aaKnown RBP18.2■□□□□ 0.5
TREX1-201ENST00000433541 PRC1O43663 620 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 PEX10O60683 326 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 DSG3P32926 999 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 MCM5P33992 734 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 STAT2P52630 851 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 CCNA1P78396 465 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 WTAPQ15007 396 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 TMEM67Q5HYA8 995 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 KCTD1Q719H9 257 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 ARHGAP39Q9C0H5 1083 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 RABGAP1Q9Y3P9 1069 aa18.2■□□□□ 0.5
TREX1-201ENST00000433541 FRMPD2Q68DX3 1309 aaPredicted RBP18.2■□□□□ 0.5
TREX1-201ENST00000433541 SLC4A3P48751 1232 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 ERVK-9P63128 1117 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 ERVK-24P63145 666 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 FGD1P98174 961 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 RCSD1Q6JBY9 416 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 NFXL1Q6ZNB6 911 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 RASGRP2Q7LDG7 609 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 CHURC1Q8WUH1 139 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 NEK1Q96PY6 1258 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 TXNRD2Q9NNW7 524 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 GPCPD1Q9NPB8 672 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 PPP1R9AQ9ULJ8 1098 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 MYH6P13533 1939 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 MYPNQ86TC9 1320 aa18.19■□□□□ 0.5
TREX1-201ENST00000433541 DOCK3Q8IZD9 2030 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 A0A0G2JMZ2 1700 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 HOXD10P28358 340 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 OTOP1Q7RTM1 612 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 MB21D2Q8IYB1 491 aaPredicted RBP18.18■□□□□ 0.5
TREX1-201ENST00000433541 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 MB21D1Q8N884 522 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 PRPF38AQ8NAV1 312 aaKnown RBP18.18■□□□□ 0.5
TREX1-201ENST00000433541 COA7Q96BR5 231 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 RBPJLQ9UBG7 517 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 MORF4L1Q9UBU8 362 aa18.18■□□□□ 0.5
TREX1-201ENST00000433541 PLXNB2O15031 1838 aa18.17■□□□□ 0.5
TREX1-201ENST00000433541 ZBED4O75132 1171 aa18.17■□□□□ 0.5
TREX1-201ENST00000433541 HSPA4P34932 840 aa18.17■□□□□ 0.5
TREX1-201ENST00000433541 FAM160B2Q86V87 743 aa18.17■□□□□ 0.5
TREX1-201ENST00000433541 TRIM47Q96LD4 638 aa18.17■□□□□ 0.5
TREX1-201ENST00000433541 JAKMIP1Q96N16 626 aaKnown RBP18.17■□□□□ 0.5
TREX1-201ENST00000433541 BTBD7Q9P203 1132 aa18.17■□□□□ 0.5
TREX1-201ENST00000433541 CCDC69A6NI79 296 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 VWA5AO00534 786 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
TREX1-201ENST00000433541 GNRH1P01148 92 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 PDHBP11177 359 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 NOVP48745 357 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 LBX2Q6XYB7 198 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 CPXCR1Q8N123 301 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 IVNS1ABPQ9Y6Y0 642 aa18.16■□□□□ 0.5
TREX1-201ENST00000433541 HMGB1P09429 215 aaKnown RBP18.15■□□□□ 0.5
TREX1-201ENST00000433541 GOLGA8HP0CJ92 632 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 MAPK4P31152 587 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 SLC16A2P36021 539 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 ANTXR2P58335 489 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 SEC23AQ15436 765 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 PKN2Q16513 984 aaKnown RBP18.15■□□□□ 0.5
TREX1-201ENST00000433541 Q3C1V9 767 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 ADCK5Q3MIX3 580 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 CATIPQ7Z7H3 387 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 NCAPG2Q86XI2 1143 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 RAET1EQ8TD07 263 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 TMEM87BQ96K49 555 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 MCOLN1Q9GZU1 580 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 SPATC1LQ9H0A9 340 aa18.15■□□□□ 0.5
TREX1-201ENST00000433541 SNX14Q9Y5W7 946 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms