RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
CCDC171-202ENST00000432954 RHBDL2Q9NX52 303 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
CCDC171-202ENST00000432954 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 NFKBIAP25963 317 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 PEX5P50542 639 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 CCNG1P51959 295 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 CABP7Q86V35 215 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 LILRB2Q8N423 598 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 PPP1R14CQ8TAE6 165 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 FRS2Q8WU20 508 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 RNPC3Q96LT9 517 aaKnown RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 PARVGQ9HBI0 331 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 GTF3C4Q9UKN8 822 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 TCHHQ07283 1943 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 BECN2A8MW95 431 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 N4BP3O15049 544 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 PHACTR2O75167 634 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 KIF5BP33176 963 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 KLC1Q07866 573 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 MSLNQ13421 630 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 TRIM71Q2Q1W2 868 aaKnown RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 CFAP58Q5T655 872 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 TBC1D9BQ66K14 1250 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 PCDHB2Q9Y5E7 798 aa12.12□□□□□ -0.47
CCDC171-202ENST00000432954 TARBP1Q13395 1621 aaKnown RBP12.12□□□□□ -0.47
CCDC171-202ENST00000432954 TEX28O15482 410 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 DIAPH1O60610 1272 aaKnown RBP12.11□□□□□ -0.47
CCDC171-202ENST00000432954 MTTPP55157 894 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 PSME1Q06323 249 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 ZBTB17Q13105 803 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC171-202ENST00000432954 USP6NLQ92738 828 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 CBX8Q9HC52 389 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 ATAD3AQ9NVI7 634 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 SAMM50Q9Y512 469 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 KDM5CP41229 1560 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
CCDC171-202ENST00000432954 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 FLOT1O75955 427 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 UBL4AP11441 157 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 STAT6P42226 847 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 HALP42357 657 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 EVA1CP58658 441 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 GPSM2P81274 684 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 PDE1BQ01064 536 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 ARHGAP18Q8N392 663 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 ERP27Q96DN0 273 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 CEP63Q96MT8 703 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 SH3GL2Q99962 352 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 OSBPL5Q9H0X9 879 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-202ENST00000432954 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC171-202ENST00000432954 STK39Q9UEW8 545 aa12.11□□□□□ -0.47
CCDC171-202ENST00000432954 KDM5DQ9BY66 1539 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 GRIN2AQ12879 1464 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 SLC16A2P36021 539 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 USP46P62068 366 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 TUBA4AP68366 448 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 ADAM9Q13443 819 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 CCDC14Q49A88 953 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 POTEHQ6S545 545 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 C3orf62Q6ZUJ4 267 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 LSMEM2Q8N112 164 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 LILRB1Q8NHL6 650 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-202ENST00000432954 GSDMBQ8TAX9 411 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 ANKRD49Q8WVL7 239 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 WDR60Q8WVS4 1066 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 NCSTNQ92542 709 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-202ENST00000432954 MAELQ96JY0 434 aaKnown RBP12.1□□□□□ -0.47
CCDC171-202ENST00000432954 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 NPATQ14207 1427 aa12.1□□□□□ -0.47
CCDC171-202ENST00000432954 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 SRRM3A6NNA2 597 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-202ENST00000432954 VAMP4O75379 141 aa12.09□□□□□ -0.47
CCDC171-202ENST00000432954 HNRNPCP07910 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms