RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 LCTP09848 1927 aa17.12■□□□□ 0.33
SEC13-212ENST00000432213 DNM1LO00429 736 aa17.12■□□□□ 0.33
SEC13-212ENST00000432213 UBE3CQ15386 1083 aa17.12■□□□□ 0.33
SEC13-212ENST00000432213 MAML3Q96JK9 1138 aa17.12■□□□□ 0.33
SEC13-212ENST00000432213 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
SEC13-212ENST00000432213 LRRC37A2A6NM11 1700 aa17.12■□□□□ 0.33
SEC13-212ENST00000432213 FAM83BQ5T0W9 1011 aa17.11■□□□□ 0.33
SEC13-212ENST00000432213 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
SEC13-212ENST00000432213 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
SEC13-212ENST00000432213 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
SEC13-212ENST00000432213 ARHGEF10LQ9HCE6 1279 aa17.11■□□□□ 0.33
SEC13-212ENST00000432213 HOXC10Q9NYD6 342 aa17.11■□□□□ 0.33
SEC13-212ENST00000432213 GSG1L2A8MUP6 293 aa17.1■□□□□ 0.33
SEC13-212ENST00000432213 WDR46O15213 610 aaKnown RBP17.1■□□□□ 0.33
SEC13-212ENST00000432213 RASA1P20936 1047 aa17.1■□□□□ 0.33
SEC13-212ENST00000432213 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
SEC13-212ENST00000432213 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
SEC13-212ENST00000432213 FERMT2Q96AC1 680 aa17.1■□□□□ 0.33
SEC13-212ENST00000432213 ZNF214Q9UL59 606 aaPredicted RBP17.1■□□□□ 0.33
SEC13-212ENST00000432213 ATP11BQ9Y2G3 1177 aa17.1■□□□□ 0.33
SEC13-212ENST00000432213 EYSQ5T1H1 3165 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 M0R2C6 588 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 SEPT4O43236 478 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 STRNO43815 780 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
SEC13-212ENST00000432213 ITGB8P26012 769 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 IRX5P78411 483 aaPredicted RBP17.09■□□□□ 0.33
SEC13-212ENST00000432213 LRRC41Q15345 812 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 C9orf50Q5SZB4 431 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 SLC39A5Q6ZMH5 540 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 GUCD1Q96NT3 240 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEC13-212ENST00000432213 MROH8Q9H579 483 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 RIPK3Q9Y572 518 aa17.09■□□□□ 0.33
SEC13-212ENST00000432213 ROBO3Q96MS0 1386 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 VWA5AO00534 786 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 MSCO60682 206 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 MS4A1P11836 297 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 ADCYAP1R1P41586 468 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 SNX17Q15036 470 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 MB21D1Q8N884 522 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 OTUD7AQ8TE49 926 aaPredicted RBP17.08■□□□□ 0.32
SEC13-212ENST00000432213 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.32
SEC13-212ENST00000432213 CCDC17Q96LX7 622 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
SEC13-212ENST00000432213 RAD21O60216 631 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 ZNF792Q3KQV3 632 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 GPR153Q6NV75 609 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 ABRAQ8N0Z2 381 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 FAM161BQ96MY7 647 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 SEC62Q99442 399 aaKnown RBP17.07■□□□□ 0.32
SEC13-212ENST00000432213 MMP19Q99542 508 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 PDLIM7Q9NR12 457 aa17.07■□□□□ 0.32
SEC13-212ENST00000432213 UNC80Q8N2C7 3258 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 IGKV6D-41A0A0C4DH26 115 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 DLL1O00548 723 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 ADCY6O43306 1168 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 PRDM1O75626 825 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 NDUFB10O96000 172 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 PGK1P00558 417 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 ZNF865P0CJ78 1059 aaPredicted RBP17.06■□□□□ 0.32
SEC13-212ENST00000432213 FCER1AP12319 257 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 SHHQ15465 462 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 BADQ92934 168 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 FGD4Q96M96 766 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 KANSL2Q9H9L4 492 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 PRDM5Q9NQX1 630 aaPredicted RBP17.06■□□□□ 0.32
SEC13-212ENST00000432213 ECHDC1Q9NTX5 307 aa17.06■□□□□ 0.32
SEC13-212ENST00000432213 POTEB2H3BUK9 544 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 EPHB4P54760 987 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 SBK1Q52WX2 424 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 RASGRP2Q7LDG7 609 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 ARPP21Q9UBL0 812 aaPredicted RBP17.05■□□□□ 0.32
SEC13-212ENST00000432213 STXBP5LQ9Y2K9 1186 aa17.05■□□□□ 0.32
SEC13-212ENST00000432213 MYADML2A6NDP7 307 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 MINDY4BA8MYZ0 360 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 STAT3P40763 770 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 TINF2Q9BSI4 451 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 A0A0C4DFX4 3053 aa17.04■□□□□ 0.32
SEC13-212ENST00000432213 GBF1Q92538 1859 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 FOXP2O15409 715 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 GPAA1O43292 621 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 SLC25A27O95847 323 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 SNAI1O95863 264 aaPredicted RBP17.03■□□□□ 0.32
SEC13-212ENST00000432213 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
SEC13-212ENST00000432213 ARRDC4Q8NCT1 418 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 APPBP2Q92624 585 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 CHMP4CQ96CF2 233 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 GOPCQ9HD26 462 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 PHF24Q9UPV7 400 aa17.03■□□□□ 0.32
SEC13-212ENST00000432213 PCDHB15Q9Y5E8 787 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms