RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 BTDP43251 543 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 TRAPPC10P48553 1259 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 DHX8Q14562 1220 aaKnown RBP14.68□□□□□ -0.06
DDX56-204ENST00000431640 PFKFB3Q16875 520 aaPredicted RBP14.68□□□□□ -0.06
DDX56-204ENST00000431640 C9orf131Q5VYM1 1079 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 CIAPIN1Q6FI81 312 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 RCSD1Q6JBY9 416 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 SRBD1Q8N5C6 995 aaKnown RBP14.68□□□□□ -0.06
DDX56-204ENST00000431640 FERMT2Q96AC1 680 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 CLIC6Q96NY7 704 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 CLIP2Q9UDT6 1046 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 CNTNAP5Q8WYK1 1306 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 IKBKBO14920 756 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 MYO1BO43795 1136 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 EGFRP00533 1210 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 TPM2P07951 284 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 RHBDL3P58872 404 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 TEX11Q8IYF3 940 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 AOPEPQ8N6M6 819 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 OXER1Q8TDS5 423 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 PCDHB6Q9Y5E3 794 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 NMT2O60551 498 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 CRKP46108 304 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 NLRP5P59047 1200 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 EVX2Q03828 476 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 LONRF3Q496Y0 759 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 CCDC186Q7Z3E2 898 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 PNMA1Q8ND90 353 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 KIAA1524Q8TCG1 905 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 IL17RBQ9NRM6 502 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 SPTLC3Q9NUV7 552 aa14.67□□□□□ -0.06
DDX56-204ENST00000431640 GMPSP49915 693 aaPredicted RBP14.66□□□□□ -0.06
DDX56-204ENST00000431640 GRM4Q14833 912 aa14.66□□□□□ -0.06
DDX56-204ENST00000431640 DPCR1Q3MIW9 517 aa14.66□□□□□ -0.06
DDX56-204ENST00000431640 GALNT17Q6IS24 598 aa14.66□□□□□ -0.06
DDX56-204ENST00000431640 APOBEC3HQ6NTF7 200 aaKnown RBP14.66□□□□□ -0.06
DDX56-204ENST00000431640 MAPKAPK5Q8IW41 473 aa14.66□□□□□ -0.06
DDX56-204ENST00000431640 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
DDX56-204ENST00000431640 SIPA1L1O43166 1804 aa14.66□□□□□ -0.06
DDX56-204ENST00000431640 MYO3BQ8WXR4 1341 aa14.65□□□□□ -0.06
DDX56-204ENST00000431640 C16orf86Q6ZW13 317 aa14.65□□□□□ -0.06
DDX56-204ENST00000431640 TRIML1Q8N9V2 468 aa14.65□□□□□ -0.06
DDX56-204ENST00000431640 ERCC4Q92889 916 aaPredicted RBP14.65□□□□□ -0.06
DDX56-204ENST00000431640 PYM1Q9BRP8 204 aaKnown RBP14.65□□□□□ -0.06
DDX56-204ENST00000431640 IMPACTQ9P2X3 320 aa14.65□□□□□ -0.06
DDX56-204ENST00000431640 DACH1Q9UI36 760 aa14.65□□□□□ -0.06
DDX56-204ENST00000431640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 ATP2B1P20020 1258 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 RASA1P20936 1047 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 PTGS1P23219 599 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 SMARCA1P28370 1054 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 CDK8P49336 464 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 PLCD1P51178 756 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 EIF6P56537 245 aaKnown RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 MDM2Q00987 491 aaPredicted RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 CT47A1Q5JQC4 288 aaPredicted RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 DNTTIP2Q5QJE6 756 aaKnown RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 AGBL3Q8NEM8 1001 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 TNFRSF25Q93038 417 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 KCNF1Q9H3M0 494 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 GJA3Q9Y6H8 435 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 BIN1O00499 593 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 POLR2DO15514 142 aaKnown RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 GSDMDP57764 484 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 PNOCQ13519 176 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 TTC38Q5R3I4 469 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 NT5DC1Q5TFE4 455 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 HHIPL2Q6UWX4 724 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 METTL16Q86W50 562 aaKnown RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 TEKT1Q969V4 418 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 ZBED3Q96IU2 234 aaPredicted RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 ZDHHC15Q96MV8 337 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 CSRNP2Q9H175 543 aa14.64□□□□□ -0.07
DDX56-204ENST00000431640 DDX4Q9NQI0 724 aaKnown RBP14.64□□□□□ -0.07
DDX56-204ENST00000431640 hCG_1642624A0A1W2PR95 340 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 GRIN3BO60391 1043 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 SMC2O95347 1197 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 CACNB3P54284 484 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 TNIP1Q15025 636 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 POSTNQ15063 836 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 NPY5RQ15761 445 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 BLIDQ8IZY5 108 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 MLKLQ8NB16 471 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 SAP30BPQ9UHR5 308 aaKnown RBP14.63□□□□□ -0.07
DDX56-204ENST00000431640 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 SERPINA10Q9UK55 444 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 PCDHA4Q9UN74 947 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
DDX56-204ENST00000431640 PCDHA5Q9Y5H7 936 aa14.63□□□□□ -0.07
DDX56-204ENST00000431640 ASTN2O75129 1339 aaPredicted RBP14.62□□□□□ -0.07
DDX56-204ENST00000431640 FLT1P17948 1338 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 PALM3A6NDB9 673 aaPredicted RBP14.62□□□□□ -0.07
DDX56-204ENST00000431640 CBFA2T2O43439 604 aa14.62□□□□□ -0.07
DDX56-204ENST00000431640 ZNF280AP59817 542 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms