RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CCNA1P78396 465 aa14.12□□□□□ -0.15
HDAC4-202ENST00000430200 VPS53Q5VIR6 699 aa14.12□□□□□ -0.15
HDAC4-202ENST00000430200 C7orf61Q8IZ16 206 aa14.12□□□□□ -0.15
HDAC4-202ENST00000430200 ANKLE1Q8NAG6 615 aa14.12□□□□□ -0.15
HDAC4-202ENST00000430200 FSD1Q9BTV5 496 aa14.12□□□□□ -0.15
HDAC4-202ENST00000430200 ZNF214Q9UL59 606 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-202ENST00000430200 ADAMTS5Q9UNA0 930 aa14.12□□□□□ -0.15
HDAC4-202ENST00000430200 GLRX3O76003 335 aaKnown RBP14.11□□□□□ -0.15
HDAC4-202ENST00000430200 NDUFB10O96000 172 aa14.11□□□□□ -0.15
HDAC4-202ENST00000430200 TDO2P48775 406 aa14.11□□□□□ -0.15
HDAC4-202ENST00000430200 GIMAP6Q6P9H5 292 aa14.11□□□□□ -0.15
HDAC4-202ENST00000430200 NECAB2Q7Z6G3 386 aa14.11□□□□□ -0.15
HDAC4-202ENST00000430200 CCAR1Q8IX12 1150 aaKnown RBP14.11□□□□□ -0.15
HDAC4-202ENST00000430200 IFNL3Q8IZI9 196 aa14.11□□□□□ -0.15
HDAC4-202ENST00000430200 SHCBP1Q8NEM2 672 aa14.11□□□□□ -0.15
HDAC4-202ENST00000430200 ZMYND8Q9ULU4 1186 aaPredicted RBP14.11□□□□□ -0.15
HDAC4-202ENST00000430200 SOX1O00570 391 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-202ENST00000430200 EVI5O60447 810 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 ZFYP08048 801 aaPredicted RBP14.1□□□□□ -0.15
HDAC4-202ENST00000430200 PLS1Q14651 629 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 LRRC26Q2I0M4 334 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 ANO1Q5XXA6 986 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 AMOTL1Q8IY63 956 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 LRRC47Q8N1G4 583 aaKnown RBP14.1□□□□□ -0.15
HDAC4-202ENST00000430200 CEP95Q96GE4 821 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 DDRGK1Q96HY6 314 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 C11orf49Q9H6J7 331 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 SH2D4AQ9H788 454 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 KANSL2Q9H9L4 492 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 CWC22Q9HCG8 908 aaKnown RBP14.1□□□□□ -0.15
HDAC4-202ENST00000430200 INCENPQ9NQS7 918 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 PPP1R9AQ9ULJ8 1098 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 IVNS1ABPQ9Y6Y0 642 aa14.1□□□□□ -0.15
HDAC4-202ENST00000430200 A0A0D9SFI3 127 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 VWA5AO00534 786 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 PGK2P07205 417 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 SYN1P17600 705 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 HDAC1Q13547 482 aaPredicted RBP14.09□□□□□ -0.15
HDAC4-202ENST00000430200 NCAPG2Q86XI2 1143 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 TRMT44Q8IYL2 757 aaKnown RBP14.09□□□□□ -0.15
HDAC4-202ENST00000430200 NBPF3Q9H094 633 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 HOXC10Q9NYD6 342 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 STAP2Q9UGK3 403 aa14.09□□□□□ -0.15
HDAC4-202ENST00000430200 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDAC4-202ENST00000430200 MYH6P13533 1939 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 RAD21O60216 631 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 PDE1AP54750 535 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 FAM47AQ5JRC9 791 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 PRAMEF19Q5SWL8 479 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 ANKRD45Q5TZF3 282 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 MB21D1Q8N884 522 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 LENG1Q96BZ8 264 aaPredicted RBP14.08□□□□□ -0.16
HDAC4-202ENST00000430200 MAML3Q96JK9 1138 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 FAM227BQ96M60 508 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 NYAP2Q9P242 653 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 DDX20Q9UHI6 824 aaKnown RBP14.08□□□□□ -0.16
HDAC4-202ENST00000430200 RIPK3Q9Y572 518 aa14.08□□□□□ -0.16
HDAC4-202ENST00000430200 PATL2C9JE40 543 aaKnown RBP14.07□□□□□ -0.16
HDAC4-202ENST00000430200 F5H6K3 240 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 ERC2O15083 957 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 NMT2O60551 498 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 APPP05067 770 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 TAL1P17542 331 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-202ENST00000430200 GNAT2P19087 354 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 CTDSPL2Q05D32 466 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 KLRC3Q07444 240 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 PPARAQ07869 468 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 MFSD14CQ5VZR4 134 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 OLFML2BQ68BL8 750 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 ZNF589Q86UQ0 364 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-202ENST00000430200 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 CHMP4CQ96CF2 233 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 FGD4Q96M96 766 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 GDF15Q99988 308 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 LNPKQ9C0E8 428 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 GOPCQ9HD26 462 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 UNC80Q8N2C7 3258 aa14.07□□□□□ -0.16
HDAC4-202ENST00000430200 IGHDP01880 384 aa14.06□□□□□ -0.16
HDAC4-202ENST00000430200 EXOC6Q8TAG9 804 aa14.06□□□□□ -0.16
HDAC4-202ENST00000430200 SLF1Q9BQI6 1058 aa14.06□□□□□ -0.16
HDAC4-202ENST00000430200 MROH8Q9H579 483 aa14.06□□□□□ -0.16
HDAC4-202ENST00000430200 CLIP2Q9UDT6 1046 aa14.06□□□□□ -0.16
HDAC4-202ENST00000430200 NR2E3Q9Y5X4 410 aa14.06□□□□□ -0.16
HDAC4-202ENST00000430200 CNGA1P29973 690 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 MAGEA10P43363 369 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-202ENST00000430200 ZNF792Q3KQV3 632 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 GJC2Q5T442 439 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-202ENST00000430200 DPP9Q86TI2 863 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 SMC5Q8IY18 1101 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 ABRAQ8N0Z2 381 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 NEDD1Q8NHV4 660 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 NAPBQ9H115 298 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
HDAC4-202ENST00000430200 ADCY6O43306 1168 aa14.04□□□□□ -0.16
HDAC4-202ENST00000430200 STRNO43815 780 aa14.04□□□□□ -0.16
HDAC4-202ENST00000430200 CAPN2P17655 700 aa14.04□□□□□ -0.16
HDAC4-202ENST00000430200 STAT3P40763 770 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms