RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 FAM83BQ5T0W9 1011 aa20.18■□□□□ 0.82
UBE3D-204ENST00000430071 LPAR1Q92633 364 aa20.18■□□□□ 0.82
UBE3D-204ENST00000430071 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
UBE3D-204ENST00000430071 RPTORQ8N122 1335 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 WDR46O15213 610 aaKnown RBP20.17■□□□□ 0.82
UBE3D-204ENST00000430071 RGS2P41220 211 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
UBE3D-204ENST00000430071 CCNA1P78396 465 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 CTDSPL2Q05D32 466 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 PPARAQ07869 468 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 LRRFIP1Q32MZ4 808 aaKnown RBP20.17■□□□□ 0.82
UBE3D-204ENST00000430071 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 SPATC1LQ9H0A9 340 aa20.17■□□□□ 0.82
UBE3D-204ENST00000430071 CWC22Q9HCG8 908 aaKnown RBP20.17■□□□□ 0.82
UBE3D-204ENST00000430071 HMX1Q9NP08 348 aaPredicted RBP20.17■□□□□ 0.82
UBE3D-204ENST00000430071 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 SLC15A5A6NIM6 579 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 GRB14Q14449 540 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 PLS1Q14651 629 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 TMEM132BQ14DG7 1078 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 CEP95Q96GE4 821 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 APBA2Q99767 749 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 NAPBQ9H115 298 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 SH2D4AQ9H788 454 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 NYAP2Q9P242 653 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
UBE3D-204ENST00000430071 H0YGN5 161 aa20.15■□□□□ 0.82
UBE3D-204ENST00000430071 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-204ENST00000430071 ERCC3P19447 782 aa20.15■□□□□ 0.82
UBE3D-204ENST00000430071 ZNF444Q8N0Y2 327 aaPredicted RBP20.15■□□□□ 0.82
UBE3D-204ENST00000430071 PAWRQ96IZ0 340 aaKnown RBP20.15■□□□□ 0.82
UBE3D-204ENST00000430071 ADAMTS5Q9UNA0 930 aa20.15■□□□□ 0.82
UBE3D-204ENST00000430071 COBLO75128 1261 aa20.14■□□□□ 0.81
UBE3D-204ENST00000430071 ZNF589Q86UQ0 364 aaPredicted RBP20.14■□□□□ 0.81
UBE3D-204ENST00000430071 DPF3Q92784 378 aa20.14■□□□□ 0.81
UBE3D-204ENST00000430071 GOPCQ9HD26 462 aa20.14■□□□□ 0.81
UBE3D-204ENST00000430071 F5H6K3 240 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 NDUFB10O96000 172 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 ADORA2AP29274 412 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 KLRC3Q07444 240 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
UBE3D-204ENST00000430071 TICAM2Q86XR7 235 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 LRRC47Q8N1G4 583 aaKnown RBP20.13■□□□□ 0.81
UBE3D-204ENST00000430071 REPS2Q8NFH8 660 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 CHMP4CQ96CF2 233 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 MTMR4Q9NYA4 1195 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.13■□□□□ 0.81
UBE3D-204ENST00000430071 IVNS1ABPQ9Y6Y0 642 aa20.13■□□□□ 0.81
UBE3D-204ENST00000430071 VWA5AO00534 786 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 IGHA2P01877 340 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 CYP2C19P33261 490 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 TFAP4Q01664 338 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 NCAPG2Q86XI2 1143 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 TRPV1Q8NER1 839 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 PCDH10Q9P2E7 1040 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 PPP1R9AQ9ULJ8 1098 aa20.12■□□□□ 0.81
UBE3D-204ENST00000430071 RANBP2P49792 3224 aaKnown RBP20.12■□□□□ 0.81
UBE3D-204ENST00000430071 NMT2O60551 498 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 HOXC6P09630 235 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 BMP2KLQ5H9B9 411 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 LHX8Q68G74 356 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 MB21D1Q8N884 522 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 SHCBP1Q8NEM2 672 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 NEDD1Q8NHV4 660 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 HELLSQ9NRZ9 838 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 ZNF214Q9UL59 606 aaPredicted RBP20.11■□□□□ 0.81
UBE3D-204ENST00000430071 LAMA4Q16363 1823 aa20.11■□□□□ 0.81
UBE3D-204ENST00000430071 RASGRP2Q7LDG7 609 aa20.1■□□□□ 0.81
UBE3D-204ENST00000430071 TRMT44Q8IYL2 757 aaKnown RBP20.1■□□□□ 0.81
UBE3D-204ENST00000430071 MKL1Q969V6 931 aa20.1■□□□□ 0.81
UBE3D-204ENST00000430071 OGDHLQ9ULD0 1010 aa20.1■□□□□ 0.81
UBE3D-204ENST00000430071 PLIN4Q96Q06 1357 aa20.1■□□□□ 0.81
UBE3D-204ENST00000430071 FGAP02671 866 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 TSPY3P0CV98 308 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 TSPY8P0CW00 308 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 PDE4BQ07343 736 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 MCMDC2Q4G0Z9 681 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 DPP9Q86TI2 863 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 IL17RBQ9NRM6 502 aa20.09■□□□□ 0.81
UBE3D-204ENST00000430071 COLQQ9Y215 455 aaPredicted RBP20.09■□□□□ 0.81
UBE3D-204ENST00000430071 SLC34A2O95436 690 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 ALX1Q15699 326 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 PRAMEF19Q5SWL8 479 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 SLF1Q9BQI6 1058 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 HTATIP2Q9BUP3 242 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 DIAPH3Q9NSV4 1193 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 RIPK3Q9Y572 518 aa20.08■□□□□ 0.81
UBE3D-204ENST00000430071 HIP1O00291 1037 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 STRNO43815 780 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 TTLL1O95922 423 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 HSPD1P10809 573 aaKnown RBP20.08■□□□□ 0.8
UBE3D-204ENST00000430071 CHMLP26374 656 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 STAT3P40763 770 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 HABP4Q5JVS0 413 aaKnown RBP20.08■□□□□ 0.8
UBE3D-204ENST00000430071 MFSD14CQ5VZR4 134 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 CWC27Q6UX04 472 aaKnown RBP20.08■□□□□ 0.8
UBE3D-204ENST00000430071 RIOX2Q8IUF8 465 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 NBPF3Q9H094 633 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms