RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 HOXA10P31260 410 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-207ENST00000429896 ADD1P35611 737 aaKnown RBP14.57□□□□□ -0.08
PTCH1-207ENST00000429896 LEKR1Q6ZMV7 388 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 BLIDQ8IZY5 108 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 BCL2L12Q9HB09 334 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 ZSWIM5Q9P217 1185 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 ERICH4A6NGS2 130 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 USP17L10C9JJH3 530 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 PDIA3P30101 505 aaKnown RBP14.57□□□□□ -0.08
PTCH1-207ENST00000429896 FILIP1Q7Z7B0 1213 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 ADCK5Q3MIX3 580 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 MLXIPQ9HAP2 919 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 JAK2O60674 1132 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 KIAA1328Q86T90 577 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 TPCN1Q9ULQ1 816 aa14.57□□□□□ -0.08
PTCH1-207ENST00000429896 SYCE3A1L190 88 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 PLCD1P51178 756 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 SEPT2Q15019 361 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 CALCRLQ16602 461 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
PTCH1-207ENST00000429896 ALX1Q15699 326 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 CCDC113Q9H0I3 377 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 LMO7Q8WWI1 1683 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 EPHX2P34913 555 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 CCDC40Q4G0X9 1142 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-207ENST00000429896 ELP3Q9H9T3 547 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 APOA5Q6Q788 366 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 FAM151AQ8WW52 585 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 BIN1O00499 593 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 CETN1Q12798 172 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 KAZALD1Q96I82 304 aa14.56□□□□□ -0.08
PTCH1-207ENST00000429896 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
PTCH1-207ENST00000429896 GSG1L2A8MUP6 293 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-207ENST00000429896 CDC37L1Q7L3B6 337 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 FLT1P17948 1338 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 CASP7P55210 303 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 SLF1Q9BQI6 1058 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 PODXL2Q9NZ53 605 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 LTBP4Q8N2S1 1624 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 CA8P35219 290 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 FAM114A1Q8IWE2 563 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 PLIN2Q99541 437 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 FEM1BQ9UK73 627 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 ANO1Q5XXA6 986 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 TBC1D10CQ8IV04 446 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 PIGSQ96S52 555 aa14.55□□□□□ -0.08
PTCH1-207ENST00000429896 SLC44A5Q8NCS7 719 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 FAM208AQ9UK61 1670 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 CXCL9Q07325 125 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 ZRSR2Q15696 482 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 FAM83BQ5T0W9 1011 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 FASTKD5Q7L8L6 764 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 NEDD4P46934 1319 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 CELF2O95319 508 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 FMNL1O95466 1100 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 STX1AQ16623 288 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 SV2BQ7L1I2 683 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 APBB1IPQ7Z5R6 666 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 TCHPQ9BT92 498 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 LUC7LQ9NQ29 371 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 SPP2Q13103 211 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 USP37Q86T82 979 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 IQUBQ8NA54 791 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 EEF2P13639 858 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 ZNF157P51786 506 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 CWC15Q9P013 229 aaKnown RBP14.54□□□□□ -0.08
PTCH1-207ENST00000429896 LRWD1Q9UFC0 647 aa14.54□□□□□ -0.08
PTCH1-207ENST00000429896 GAS7O60861 476 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 SETD1AO15047 1707 aaKnown RBP14.53□□□□□ -0.08
PTCH1-207ENST00000429896 IL1R1P14778 569 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 TCERG1LQ5VWI1 586 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 GBP2P32456 591 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-207ENST00000429896 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 MIER3Q7Z3K6 550 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 ZNF397Q8NF99 534 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-207ENST00000429896 DEFB129Q9H1M3 183 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 LIFRP42702 1097 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 MTIF2P46199 727 aaKnown RBP14.53□□□□□ -0.08
PTCH1-207ENST00000429896 NECTIN1Q15223 517 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 PRR16Q569H4 304 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 GLG1Q92896 1179 aa14.53□□□□□ -0.08
PTCH1-207ENST00000429896 RNF26Q9BY78 433 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-207ENST00000429896 C12orf60Q5U649 245 aa14.52□□□□□ -0.08
PTCH1-207ENST00000429896 CCDC102AQ96A19 550 aa14.52□□□□□ -0.08
PTCH1-207ENST00000429896 GTPBP4Q9BZE4 634 aaKnown RBP14.52□□□□□ -0.08
PTCH1-207ENST00000429896 PHRF1Q9P1Y6 1649 aaKnown RBP14.52□□□□□ -0.08
PTCH1-207ENST00000429896 GPC2Q8N158 579 aa14.52□□□□□ -0.08
PTCH1-207ENST00000429896 RRAGCQ9HB90 399 aa14.52□□□□□ -0.08
PTCH1-207ENST00000429896 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.08
PTCH1-207ENST00000429896 ARHGEF35A5YM69 484 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms