RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 TMEM67Q5HYA8 995 aa10□□□□□ -0.81
NUP98-207ENST00000429801 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
NUP98-207ENST00000429801 IGDCC4Q8TDY8 1250 aa10□□□□□ -0.81
NUP98-207ENST00000429801 L3MBTL3Q96JM7 780 aaPredicted RBP10□□□□□ -0.81
NUP98-207ENST00000429801 NUCKS1Q9H1E3 243 aaKnown RBP10□□□□□ -0.81
NUP98-207ENST00000429801 ADARB2Q9NS39 739 aaKnown RBP10□□□□□ -0.81
NUP98-207ENST00000429801 TPCN1Q9ULQ1 816 aa10□□□□□ -0.81
NUP98-207ENST00000429801 GLTPD2A6NH11 291 aa10□□□□□ -0.81
NUP98-207ENST00000429801 SH2B2O14492 632 aaPredicted RBP10□□□□□ -0.81
NUP98-207ENST00000429801 TSPY3P0CV98 308 aa10□□□□□ -0.81
NUP98-207ENST00000429801 TSPY8P0CW00 308 aa10□□□□□ -0.81
NUP98-207ENST00000429801 TFAP4Q01664 338 aa10□□□□□ -0.81
NUP98-207ENST00000429801 ZSCAN26Q16670 478 aa10□□□□□ -0.81
NUP98-207ENST00000429801 TTC31Q49AM3 519 aaPredicted RBP10□□□□□ -0.81
NUP98-207ENST00000429801 MUM1L1Q5H9M0 696 aa10□□□□□ -0.81
NUP98-207ENST00000429801 ARMC3Q5W041 872 aa10□□□□□ -0.81
NUP98-207ENST00000429801 CSRNP1Q96S65 589 aa10□□□□□ -0.81
NUP98-207ENST00000429801 ZSCAN10Q96SZ4 725 aaPredicted RBP10□□□□□ -0.81
NUP98-207ENST00000429801 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
NUP98-207ENST00000429801 HACL1Q9UJ83 578 aa10□□□□□ -0.81
NUP98-207ENST00000429801 RASA1P20936 1047 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 EVCP57679 992 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 WTAPQ15007 396 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 FAM47AQ5JRC9 791 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 KRBA2Q6ZNG9 492 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 SH3BP5LQ7L8J4 393 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
NUP98-207ENST00000429801 SLC44A5Q8NCS7 719 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 ANKRD20A12PQ8NF67 263 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 NKX2-3Q8TAU0 364 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 THOC1Q96FV9 657 aaKnown RBP9.99□□□□□ -0.81
NUP98-207ENST00000429801 ZNF274Q96GC6 653 aaPredicted RBP9.99□□□□□ -0.81
NUP98-207ENST00000429801 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 SLC24A3Q9HC58 644 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 HERC5Q9UII4 1024 aaKnown RBP9.99□□□□□ -0.81
NUP98-207ENST00000429801 CNTNAP1P78357 1384 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 TNKSO95271 1327 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 ANKRD33BA6NCL7 494 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 APOBRQ0VD83 1088 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 CUL4AQ13619 759 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 ME3Q16798 604 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 NFXL1Q6ZNB6 911 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 SGMS1Q86VZ5 419 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 APOBEC3FQ8IUX4 373 aaKnown RBP9.99□□□□□ -0.81
NUP98-207ENST00000429801 GPT2Q8TD30 523 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 TRPM4Q8TD43 1214 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 INTS4Q96HW7 963 aaKnown RBP9.99□□□□□ -0.81
NUP98-207ENST00000429801 ZKSCAN3Q9BRR0 538 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 LY9Q9HBG7 655 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 TCP11L1Q9NUJ3 509 aa9.99□□□□□ -0.81
NUP98-207ENST00000429801 CCDC69A6NI79 296 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 SKILP12757 684 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 RASA3Q14644 834 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 SYNE3Q6ZMZ3 975 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 PAIP2Q9BPZ3 127 aaKnown RBP9.98□□□□□ -0.81
NUP98-207ENST00000429801 TMEM39BQ9GZU3 492 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 BIN2Q9UBW5 565 aaPredicted RBP9.98□□□□□ -0.81
NUP98-207ENST00000429801 KLF18A0A0U1RQI7 1052 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 IQCA1LA6NCM1 817 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 LIG1P18858 919 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 SHMT1P34896 483 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 IFIT1BQ5T764 474 aaKnown RBP9.98□□□□□ -0.81
NUP98-207ENST00000429801 MFSD4BQ5TF39 518 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 ANGEL2Q5VTE6 544 aaKnown RBP9.98□□□□□ -0.81
NUP98-207ENST00000429801 NEDD1Q8NHV4 660 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 FAXDC2Q96IV6 333 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
NUP98-207ENST00000429801 ZNF232Q9UNY5 417 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.98□□□□□ -0.81
NUP98-207ENST00000429801 PAXBP1Q9Y5B6 917 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 SLC12A7Q9Y666 1083 aa9.98□□□□□ -0.81
NUP98-207ENST00000429801 TBC1D12O60347 775 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 CAPN15O75808 1086 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 LARGE1O95461 756 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 CALRP27797 417 aaKnown RBP9.97□□□□□ -0.81
NUP98-207ENST00000429801 ZNF445P59923 1031 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 SEC23AQ15436 765 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 TATDN1Q6P1N9 297 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 USP50Q70EL3 339 aaPredicted RBP9.97□□□□□ -0.81
NUP98-207ENST00000429801 SRLQ86TD4 932 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 DGKHQ86XP1 1220 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 ENAHQ8N8S7 591 aaPredicted RBP9.97□□□□□ -0.81
NUP98-207ENST00000429801 DEFB129Q9H1M3 183 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.97□□□□□ -0.812e-7■■□□□ 11.6
NUP98-207ENST00000429801 PICK1Q9NRD5 415 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 PITPNM2Q9BZ72 1349 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 GOLGA6CA6NDK9 693 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 GOLGA6BA6NDN3 693 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 PFKFB2O60825 505 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 GOLGA6DP0CG33 693 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
NUP98-207ENST00000429801 HIRAP54198 1017 aaPredicted RBP9.97□□□□□ -0.81
NUP98-207ENST00000429801 STK3Q13188 491 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 CERKLQ49MI3 558 aaPredicted RBP9.97□□□□□ -0.81
NUP98-207ENST00000429801 MCTP2Q6DN12 878 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
NUP98-207ENST00000429801 DNAJC18Q9H819 358 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms