RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 WTAPQ15007 396 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 TMEM67Q5HYA8 995 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 GPATCH4Q5T3I0 446 aaKnown RBP17.53■□□□□ 0.4
GARNL3-204ENST00000429629 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 SPICE1Q8N0Z3 855 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 LRRC47Q8N1G4 583 aaKnown RBP17.53■□□□□ 0.4
GARNL3-204ENST00000429629 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
GARNL3-204ENST00000429629 PNMA1Q8ND90 353 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 FEM1BQ9UK73 627 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 RABGAP1Q9Y3P9 1069 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
GARNL3-204ENST00000429629 TBC1D8O95759 1140 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 CYP2C8P10632 490 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 PDHBP11177 359 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 BCRP11274 1271 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 DSG3P32926 999 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 BTNL9Q6UXG8 535 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 FAM160B2Q86V87 743 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 SMCR8Q8TEV9 937 aaPredicted RBP17.52■□□□□ 0.4
GARNL3-204ENST00000429629 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
GARNL3-204ENST00000429629 AGXT2Q9BYV1 514 aa17.52■□□□□ 0.4
GARNL3-204ENST00000429629 LAMA4Q16363 1823 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 SH2B2O14492 632 aaPredicted RBP17.51■□□□□ 0.39
GARNL3-204ENST00000429629 FOXN1O15353 648 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 HSPA8P11142 646 aaKnown RBP17.51■□□□□ 0.39
GARNL3-204ENST00000429629 RCAN1P53805 252 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 FAM83BQ5T0W9 1011 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 ALDH8A1Q9H2A2 487 aaPredicted RBP17.51■□□□□ 0.39
GARNL3-204ENST00000429629 R3HDMLQ9H3Y0 253 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 PRDM10Q9NQV6 1147 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 PPP1R9AQ9ULJ8 1098 aa17.51■□□□□ 0.39
GARNL3-204ENST00000429629 SPDYE16A6NNV3 312 aaPredicted RBP17.5■□□□□ 0.39
GARNL3-204ENST00000429629 FLOT1O75955 427 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 SP3Q02447 781 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 ZNF543Q08ER8 600 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 TROAPQ12815 778 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 ARHGEF6Q15052 776 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 CATIPQ7Z7H3 387 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 SLF1Q9BQI6 1058 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 BACH2Q9BYV9 841 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
GARNL3-204ENST00000429629 RBPJLQ9UBG7 517 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 CYP46A1Q9Y6A2 500 aa17.5■□□□□ 0.39
GARNL3-204ENST00000429629 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 FKTNO75072 461 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 DDAH1O94760 285 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 CALM1P0DP23 149 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 CALM2P0DP24 149 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 CALM3P0DP25 149 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
GARNL3-204ENST00000429629 STAT2P52630 851 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 EVCP57679 992 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 ASPRV1Q53RT3 343 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 CHST3Q7LGC8 479 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 GPRC5AQ8NFJ5 357 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 PNMA2Q9UL42 364 aa17.49■□□□□ 0.39
GARNL3-204ENST00000429629 TMEM232C9JQI7 657 aa17.48■□□□□ 0.39
GARNL3-204ENST00000429629 ATP2A1O14983 1001 aa17.48■□□□□ 0.39
GARNL3-204ENST00000429629 RAD21O60216 631 aa17.48■□□□□ 0.39
GARNL3-204ENST00000429629 GNRH1P01148 92 aa17.48■□□□□ 0.39
GARNL3-204ENST00000429629 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
GARNL3-204ENST00000429629 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
GARNL3-204ENST00000429629 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
GARNL3-204ENST00000429629 LOC285556D6RIA3 1793 aa17.48■□□□□ 0.39
GARNL3-204ENST00000429629 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
GARNL3-204ENST00000429629 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 VWA5AO00534 786 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 PARP1P09874 1014 aaKnown RBP17.47■□□□□ 0.39
GARNL3-204ENST00000429629 OAZ1P54368 228 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 CCNA1P78396 465 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 COL9A3Q14050 684 aaPredicted RBP17.47■□□□□ 0.39
GARNL3-204ENST00000429629 POTEEQ6S8J3 1075 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 ZNF296Q8WUU4 475 aaPredicted RBP17.47■□□□□ 0.39
GARNL3-204ENST00000429629 ERO1AQ96HE7 468 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 CPA4Q9UI42 421 aa17.47■□□□□ 0.39
GARNL3-204ENST00000429629 ZBED4O75132 1171 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 KIF5BP33176 963 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 COPB2P35606 906 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 GNAQP50148 359 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 LACTBP83111 547 aaPredicted RBP17.46■□□□□ 0.39
GARNL3-204ENST00000429629 KIF22Q14807 665 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 GRM4Q14833 912 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 ZNF654Q8IZM8 581 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 SHCBP1Q8NEM2 672 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 REPS2Q8NFH8 660 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 SLC38A10Q9HBR0 1119 aa17.46■□□□□ 0.39
GARNL3-204ENST00000429629 SENP2Q9HC62 589 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms