RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 KMT5BQ4FZB7 885 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 ANKRD20A3Q5VUR7 823 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 PLCD3Q8N3E9 789 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 GLG1Q92896 1179 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 RUNDC3BQ96NL0 473 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 LARSQ9P2J5 1176 aaKnown RBP14.1□□□□□ -0.15
LDB3-205ENST00000429277 ZMYM6O95789 1325 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 SEMA3EO15041 775 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 NELFCDQ8IXH7 590 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 ZNF496Q96IT1 587 aaPredicted RBP14.1□□□□□ -0.15
LDB3-205ENST00000429277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.1□□□□□ -0.15
LDB3-205ENST00000429277 LGR6Q9HBX8 967 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 SAR1BQ9Y6B6 198 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 POLR2BP30876 1174 aaKnown RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 KLHDC4Q8TBB5 520 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 TYW1Q9NV66 732 aaKnown RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 RAB20Q9NX57 234 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 SOS2Q07890 1332 aaPredicted RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 PNMA6EA0A0J9YXQ4 647 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 PPIP5K2O43314 1243 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 POLR2MP0CAP2 368 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 TROVE2P10155 538 aaKnown RBP eCLIP14.09□□□□□ -0.15
LDB3-205ENST00000429277 MUM1L1Q5H9M0 696 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 MFSD14BQ5SR56 506 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 RRAGAQ7L523 313 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 CUEDC2Q9H467 287 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 BRD1O95696 1058 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 BAG6P46379 1132 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 CUL4BQ13620 913 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 CDC37L1Q7L3B6 337 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 NEK8Q86SG6 692 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 GPBP1Q86WP2 473 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 TPH2Q8IWU9 490 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 OTUD7AQ8TE49 926 aaPredicted RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 EPSTI1Q96J88 318 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 C1orf112Q9NSG2 853 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 KIAA1468Q9P260 1216 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 ARMCX3Q9UH62 379 aaPredicted RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 LAD1O00515 517 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 PFKFB2O60825 505 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 PCCAP05165 728 aaPredicted RBP14.09□□□□□ -0.15
LDB3-205ENST00000429277 ABCD1P33897 745 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 CASC4Q6P4E1 433 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 PSTPIP2Q9H939 334 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 HOMER3Q9NSC5 361 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 VPS54Q9P1Q0 977 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 HYOU1Q9Y4L1 999 aa14.09□□□□□ -0.15
LDB3-205ENST00000429277 KLHL7Q8IXQ5 586 aa14.08□□□□□ -0.15
LDB3-205ENST00000429277 RSAD2Q8WXG1 361 aa14.08□□□□□ -0.15
LDB3-205ENST00000429277 KCNJ14Q9UNX9 436 aa14.08□□□□□ -0.15
LDB3-205ENST00000429277 OR52Z1P0C646 297 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 PCK1P35558 622 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 ZNF131P52739 623 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 LONRF2Q1L5Z9 754 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 ZBTB38Q8NAP3 1195 aaPredicted RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 PROCA1Q8NCQ7 364 aaPredicted RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 MLXIPQ9HAP2 919 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 GTPBP6O43824 516 aaPredicted RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 TCP1P17987 556 aaKnown RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 CMA1P23946 247 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 SND1Q7KZF4 910 aaKnown RBP eCLIP14.08□□□□□ -0.16
LDB3-205ENST00000429277 MYRIPQ8NFW9 859 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 SLF1Q9BQI6 1058 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 PCDHA12Q9UN75 941 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 ABCC4O15439 1325 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 KIF3CO14782 793 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 NT5C2P49902 561 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 ARHGEF16Q5VV41 709 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 OTUD7BQ6GQQ9 843 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 MYL10Q9BUA6 226 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 TEKT3Q9BXF9 490 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 TRIM31Q9BZY9 425 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 CFAP43Q8NDM7 1665 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 GOLGA8CPA6NN73 597 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 U2AF2P26368 475 aaKnown RBP eCLIP14.08□□□□□ -0.16
LDB3-205ENST00000429277 LONP1P36776 959 aaKnown RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 LIG4P49917 911 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 YARSP54577 528 aaKnown RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 MTX1Q13505 466 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 MAEAQ7L5Y9 396 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 SPATS2Q86XZ4 545 aaKnown RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 IFNL3Q8IZI9 196 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 FAM81BQ96LP2 452 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 LSM14BQ9BX40 385 aaKnown RBP14.08□□□□□ -0.16
LDB3-205ENST00000429277 HAUS4Q9H6D7 363 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 TPCN1Q9ULQ1 816 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 ADAMTS12P58397 1594 aa14.08□□□□□ -0.16
LDB3-205ENST00000429277 ADGRL2O95490 1459 aa14.07□□□□□ -0.16
LDB3-205ENST00000429277 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
LDB3-205ENST00000429277 KCNJ18B7U540 433 aa14.07□□□□□ -0.16
LDB3-205ENST00000429277 BPIFB4P59827 614 aa14.07□□□□□ -0.16
LDB3-205ENST00000429277 KCNJ12Q14500 433 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms