RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 EIF3HO15372 352 aaKnown RBP eCLIP16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 CUTAO60888 179 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 ACBD5Q5T8D3 534 aaPredicted RBP16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 RBM43Q6ZSC3 357 aaKnown RBP16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 WDR66Q8TBY9 1149 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 USP28Q96RU2 1077 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 WDR24Q96S15 920 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 KIAA1468Q9P260 1216 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 METAP2P50579 478 aaKnown RBP eCLIP16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 VSNL1P62760 191 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 IQCB1Q15051 598 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 CCDC129Q6ZRS4 1044 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 DESI2Q9BSY9 194 aa16.07■□□□□ 0.16
SYNGAP1-203ENST00000428982 A0A087WWV3 80 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 IARSP41252 1262 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 MYL5Q02045 173 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 CKAP4Q07065 602 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 MTA1Q13330 715 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 RSRC2Q7L4I2 434 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 IQCGQ9H095 443 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 E7EWF7 191 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 PCK1P35558 622 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 GGCXP38435 758 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 CUL3Q13618 768 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 THEMIS2Q5TEJ8 643 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 KDM4CQ9H3R0 1056 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 KCND1Q9NSA2 647 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 DBNLQ9UJU6 430 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 RGL1Q9NZL6 768 aa16.06■□□□□ 0.16
SYNGAP1-203ENST00000428982 H7C1W4 665 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 CYP21A2P08686 494 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 TIMM10P62072 90 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 SSRP1Q08945 709 aaKnown RBP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 ZNHIT6Q9NWK9 470 aaKnown RBP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 EME2A4GXA9 379 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 CLTAP09496 248 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 PAPOLAP51003 745 aaKnown RBP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 TLR7Q9NYK1 1049 aaKnown RBP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 RPS6KA4O75676 772 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 BAG6P46379 1132 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 GRIK3Q13003 919 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 PDCLQ13371 301 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 A0A1B0GVL5 298 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 FSBPO95073 299 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 ZMYM1Q5SVZ6 1142 aa16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 FNBP4Q8N3X1 1017 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-203ENST00000428982 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 POLE2P56282 527 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 PDIA6Q15084 440 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 ARFGAP2Q8N6H7 521 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 SEC62Q99442 399 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 PAPOLBQ9NRJ5 636 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 PDHBP11177 359 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 ARHGAP22Q7Z5H3 698 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 CPLX4Q7Z7G2 160 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 BPIFA3Q9BQP9 254 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 STRCQ7RTU9 1775 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 ECEL1O95672 775 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 HLFQ16534 295 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 HSP90AA4PQ58FG1 418 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 TRIM68Q6AZZ1 485 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 RIN2Q8WYP3 895 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
SYNGAP1-203ENST00000428982 PFDN1O60925 122 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 ZNF202O95125 648 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 CMA1P23946 247 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 GOLGA8FQ08AF8 430 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 GOLGA8DPQ0D2H9 430 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 HIBCHQ6NVY1 386 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 CYB5D1Q6P9G0 228 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 NSMCE1Q8WV22 266 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 TMEM165Q9HC07 324 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 POLR3EQ9NVU0 708 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 APPBP2Q92624 585 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 CCDC13Q8IYE1 715 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 CAPZA3Q96KX2 299 aa16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 NOP53Q9NZM5 478 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-203ENST00000428982 COL15A1P39059 1388 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms