RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 IL17RBQ9NRM6 502 aa8.19□□□□□ -1.1
CDC7-203ENST00000428239 EMILIN3Q9NT22 766 aa8.19□□□□□ -1.1
CDC7-203ENST00000428239 IVNS1ABPQ9Y6Y0 642 aa8.19□□□□□ -1.1
CDC7-203ENST00000428239 A0A0G2JLL6 359 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 WDR46O15213 610 aaKnown RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 ZBTB43O43298 467 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 ZBED4O75132 1171 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 APOBRQ0VD83 1088 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 PRRT2Q7Z6L0 340 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 ZNF654Q8IZM8 581 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 ASCC2Q9H1I8 757 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 ZNF646O15015 1829 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 FAM155AB1AL88 458 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 SNAP25P60880 206 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 CRHR2Q13324 411 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 COG2Q14746 738 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 RASGRP2Q7LDG7 609 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 NCAPG2Q86XI2 1143 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 CPVLQ9H3G5 476 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 HOXC10Q9NYD6 342 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 ECM29Q5VYK3 1845 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 RPS6KB1P23443 525 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 METAP2P50579 478 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDC7-203ENST00000428239 MB21D2Q8IYB1 491 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDC7-203ENST00000428239 BACH2Q9BYV9 841 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 RNF186Q9NXI6 227 aa8.18□□□□□ -1.1
CDC7-203ENST00000428239 BIN2Q9UBW5 565 aaPredicted RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 SEC63Q9UGP8 760 aaKnown RBP8.18□□□□□ -1.1
CDC7-203ENST00000428239 MYCP01106 439 aaPredicted RBP8.17□□□□□ -1.1
CDC7-203ENST00000428239 HERVK_113P62684 666 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 CCNA1P78396 465 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 USH1GQ495M9 461 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 RUFY3Q7L099 469 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 ATG4CQ96DT6 458 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 P2RX7Q99572 595 aaKnown RBP8.17□□□□□ -1.1
CDC7-203ENST00000428239 SLKQ9H2G2 1235 aaPredicted RBP8.17□□□□□ -1.1
CDC7-203ENST00000428239 TRPM7Q96QT4 1865 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 RTN1Q16799 776 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 TTBK2Q6IQ55 1244 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 ANKRD23Q86SG2 305 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 CMTR1Q8N1G2 835 aaKnown RBP8.17□□□□□ -1.1
CDC7-203ENST00000428239 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 PTPN18Q99952 460 aa8.17□□□□□ -1.1
CDC7-203ENST00000428239 KLRF2D3W0D1 207 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 TNPO2O14787 897 aaKnown RBP8.16□□□□□ -1.1
CDC7-203ENST00000428239 CA12O43570 354 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 ALAS1P13196 640 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 NT5C2P49902 561 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 ANAPC15P60006 121 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 ARHGEF6Q15052 776 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 ANKRD1Q15327 319 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 GPATCH4Q5T3I0 446 aaKnown RBP8.16□□□□□ -1.1
CDC7-203ENST00000428239 PRPF38AQ8NAV1 312 aaKnown RBP8.16□□□□□ -1.1
CDC7-203ENST00000428239 SENP2Q9HC62 589 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 CEP350Q5VT06 3117 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 SH2B2O14492 632 aaPredicted RBP8.16□□□□□ -1.1
CDC7-203ENST00000428239 PEX10O60683 326 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 CALM1P0DP23 149 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 CALM2P0DP24 149 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 CALM3P0DP25 149 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 LBX1P52954 281 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 FOSBP53539 338 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 ANTXR2P58335 489 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 RCSD1Q6JBY9 416 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 DCAF4Q8WV16 495 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 RAVER2Q9HCJ3 691 aaKnown RBP8.16□□□□□ -1.1
CDC7-203ENST00000428239 FEM1BQ9UK73 627 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 CCDC196A0A1B0GTZ2 297 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 hCG_1642624A0A1W2PR95 340 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 EPB41L2O43491 1005 aaKnown RBP8.16□□□□□ -1.1
CDC7-203ENST00000428239 PDHBP11177 359 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 SP3Q02447 781 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 ASPRV1Q53RT3 343 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 NSMFQ6X4W1 530 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 FAM160B2Q86V87 743 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 GPRC5AQ8NFJ5 357 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 NKX2-3Q8TAU0 364 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 DDX11Q96FC9 970 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
CDC7-203ENST00000428239 TM4SF4P48230 202 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 GCLCP48506 637 aaPredicted RBP8.15□□□□□ -1.1
CDC7-203ENST00000428239 CTCFP49711 727 aaPredicted RBP8.15□□□□□ -1.1
CDC7-203ENST00000428239 GNAQP50148 359 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 RABEP1Q15276 862 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 SYDE2Q5VT97 1194 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 SNRNP48Q6IEG0 339 aaKnown RBP8.15□□□□□ -1.1
CDC7-203ENST00000428239 SIAH1Q8IUQ4 282 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 TRIM22Q8IYM9 498 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 LY9Q9HBG7 655 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 FGRP09769 529 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 KIAA1755Q5JYT7 1200 aa8.15□□□□□ -1.1
CDC7-203ENST00000428239 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms