RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 MROH7Q68CQ1 1323 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 C5orf42Q9H799 3197 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 MOXD2PA6NHM9 499 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 ZBBXA8MT70 800 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 PGK2P07205 417 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 AKR1A1P14550 325 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 TIMM10P62072 90 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 GRB10Q13322 594 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 PLS1Q14651 629 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 PI16Q6UXB8 463 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 HFE2Q6ZVN8 426 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
LSG1-202ENST00000427461 TGFBRAP1Q8WUH2 860 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 VWCEQ96DN2 955 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 DHX36Q9H2U1 1008 aaKnown RBP11.36□□□□□ -0.59
LSG1-202ENST00000427461 GINM1Q9NU53 330 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 SLC5A4Q9NY91 659 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
LSG1-202ENST00000427461 SAP30BPQ9UHR5 308 aaKnown RBP11.36□□□□□ -0.59
LSG1-202ENST00000427461 COL4A4P53420 1690 aaPredicted RBP11.36□□□□□ -0.59
LSG1-202ENST00000427461 ARVCFO00192 962 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 LPXNO60711 386 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 MAP4K4O95819 1239 aaPredicted RBP11.35□□□□□ -0.59
LSG1-202ENST00000427461 LDHCP07864 332 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 ATP2A2P16615 1042 aaKnown RBP11.35□□□□□ -0.59
LSG1-202ENST00000427461 RAB3GAP1Q15042 981 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 SHCBP1Q8NEM2 672 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 PRSS33Q8NF86 280 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.35□□□□□ -0.59
LSG1-202ENST00000427461 TINF2Q9BSI4 451 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 KIAA1683Q9H0B3 1180 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 AATFQ9NY61 560 aaKnown RBP eCLIP11.35□□□□□ -0.59
LSG1-202ENST00000427461 NRBP1Q9UHY1 535 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 ELP1O95163 1332 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 FLT1P17948 1338 aa11.35□□□□□ -0.59
LSG1-202ENST00000427461 ROBO3Q96MS0 1386 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 TRIOO75962 3097 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 DCXO43602 365 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 CD4P01730 458 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 ASGR1P07306 291 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 USP14P54578 494 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 GSTO1P78417 241 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 FOXK2Q01167 660 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 TAP1Q03518 808 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 HIPK3Q9H422 1215 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 RAI14Q9P0K7 980 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 FOCADQ5VW36 1801 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 ZDBF2Q9HCK1 2354 aa11.34□□□□□ -0.59
LSG1-202ENST00000427461 PDS5AQ29RF7 1337 aaKnown RBP11.34□□□□□ -0.59
LSG1-202ENST00000427461 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
LSG1-202ENST00000427461 TLR3O15455 904 aaKnown RBP11.33□□□□□ -0.6
LSG1-202ENST00000427461 ADCY6O43306 1168 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
LSG1-202ENST00000427461 FCER1AP12319 257 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 COG2Q14746 738 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 SCLYQ96I15 445 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 MROH8Q9H579 483 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
LSG1-202ENST00000427461 KCNA5P22460 613 aa11.32□□□□□ -0.6
LSG1-202ENST00000427461 ZNF792Q3KQV3 632 aa11.32□□□□□ -0.6
LSG1-202ENST00000427461 IER5LQ5T953 404 aa11.32□□□□□ -0.6
LSG1-202ENST00000427461 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
LSG1-202ENST00000427461 UBE2ZQ9H832 354 aaPredicted RBP11.32□□□□□ -0.6
LSG1-202ENST00000427461 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
LSG1-202ENST00000427461 PA2G4Q9UQ80 394 aaKnown RBP11.32□□□□□ -0.6
LSG1-202ENST00000427461 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
LSG1-202ENST00000427461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
LSG1-202ENST00000427461 A0A1W2PRG0 241 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 GFRA3O60609 400 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 CIAO1O76071 339 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 LEXMQ3ZCV2 418 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 KIAA1755Q5JYT7 1200 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
LSG1-202ENST00000427461 TATDN1Q6P1N9 297 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 MMP19Q99542 508 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 IL16Q14005 1332 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
LSG1-202ENST00000427461 A0A1B0GUL7 405 aa11.3□□□□□ -0.6
LSG1-202ENST00000427461 DUSP11O75319 330 aaKnown RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 GUCY1A2P33402 732 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms