RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 LZTS2Q9BRK4 669 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 NFE2L3Q9Y4A8 694 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 TMC4Q7Z404 712 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 CCDC112Q8NEF3 446 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 GAKO14976 1311 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 FLT1P17948 1338 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 KIF2AO00139 706 aaPredicted RBP21.9■■□□□ 1.1
SNX17-202ENST00000427123 CTIFO43310 598 aaKnown RBP21.9■■□□□ 1.1
SNX17-202ENST00000427123 MFSD14BQ5SR56 506 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 ARL6IP4Q66PJ3 421 aaKnown RBP21.9■■□□□ 1.1
SNX17-202ENST00000427123 GALNT17Q6IS24 598 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 DAGLBQ8NCG7 672 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 GPKOWQ92917 476 aaPredicted RBP eCLIP21.9■■□□□ 1.1
SNX17-202ENST00000427123 TMEM47Q9BQJ4 181 aa21.9■■□□□ 1.1
SNX17-202ENST00000427123 KLRG2A4D1S0 409 aaPredicted RBP21.89■■□□□ 1.1
SNX17-202ENST00000427123 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.1
SNX17-202ENST00000427123 POLRMTO00411 1230 aaKnown RBP21.89■■□□□ 1.1
SNX17-202ENST00000427123 TOP1P11387 765 aaKnown RBP21.89■■□□□ 1.1
SNX17-202ENST00000427123 MCM7P33993 719 aa21.89■■□□□ 1.1
SNX17-202ENST00000427123 AFMP43652 599 aa21.89■■□□□ 1.1
SNX17-202ENST00000427123 DPYDQ12882 1025 aa21.89■■□□□ 1.1
SNX17-202ENST00000427123 GSDMAQ96QA5 445 aa21.89■■□□□ 1.1
SNX17-202ENST00000427123 POLLQ9UGP5 575 aa21.89■■□□□ 1.1
SNX17-202ENST00000427123 BRWD3Q6RI45 1802 aa21.89■■□□□ 1.09
SNX17-202ENST00000427123 PALM3A6NDB9 673 aaPredicted RBP21.89■■□□□ 1.09
SNX17-202ENST00000427123 ADAMTS3O15072 1205 aa21.89■■□□□ 1.09
SNX17-202ENST00000427123 CDK8P49336 464 aa21.89■■□□□ 1.09
SNX17-202ENST00000427123 INTS13Q9NVM9 706 aa21.89■■□□□ 1.09
SNX17-202ENST00000427123 TRMT1Q9NXH9 659 aaKnown RBP21.89■■□□□ 1.09
SNX17-202ENST00000427123 STX8Q9UNK0 236 aa21.89■■□□□ 1.09
SNX17-202ENST00000427123 FAM205AQ6ZU69 1335 aa21.88■■□□□ 1.09
SNX17-202ENST00000427123 RHBDL3P58872 404 aa21.88■■□□□ 1.09
SNX17-202ENST00000427123 E4F1Q66K89 784 aaPredicted RBP21.88■■□□□ 1.09
SNX17-202ENST00000427123 TRMT44Q8IYL2 757 aaKnown RBP21.88■■□□□ 1.09
SNX17-202ENST00000427123 IQUBQ8NA54 791 aa21.88■■□□□ 1.09
SNX17-202ENST00000427123 TSC1Q92574 1164 aa21.88■■□□□ 1.09
SNX17-202ENST00000427123 EYA3Q99504 573 aa21.88■■□□□ 1.09
SNX17-202ENST00000427123 ANKRD31Q8N7Z5 1873 aa21.88■■□□□ 1.09
SNX17-202ENST00000427123 TMEM232C9JQI7 657 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 M0R2N6 131 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 LONP1P36776 959 aaKnown RBP21.87■■□□□ 1.09
SNX17-202ENST00000427123 E2F4Q16254 413 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 WWC2Q6AWC2 1192 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 NEDD1Q8NHV4 660 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 QSER1Q2KHR3 1735 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 CCDC194A0A1B0GVG4 234 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 CDK11BP21127 795 aaKnown RBP21.87■■□□□ 1.09
SNX17-202ENST00000427123 SLC35G1Q2M3R5 365 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 ZNF710Q8N1W2 664 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 SPZ1Q9BXG8 430 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 BARHL2Q9NY43 387 aa21.87■■□□□ 1.09
SNX17-202ENST00000427123 C6orf229H3BNL8 230 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 STXBP3O00186 592 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
SNX17-202ENST00000427123 CYTH3O43739 400 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 HMGB2P26583 209 aaKnown RBP21.86■■□□□ 1.09
SNX17-202ENST00000427123 HSPA1LP34931 641 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 IL17AQ16552 155 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 TYW1BQ6NUM6 668 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 HEATR3Q7Z4Q2 680 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 C4orf32Q8N8J7 132 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 PPP1R13BQ96KQ4 1090 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 MED15Q96RN5 788 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 SYNRGQ9UMZ2 1314 aa21.86■■□□□ 1.09
SNX17-202ENST00000427123 CCP110O43303 1012 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 PDXDC2PQ6P474 469 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 SP8Q8IXZ3 490 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 ZNF592Q92610 1267 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 TMX1Q9H3N1 280 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 TXLNAP40222 546 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 CUL4BQ13620 913 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 SYCP1Q15431 976 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 SPATA1Q5VX52 437 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 PCDHA6Q9UN73 950 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 PCDHA8Q9Y5H6 950 aa21.85■■□□□ 1.09
SNX17-202ENST00000427123 TBX2Q13207 712 aaPredicted RBP21.84■■□□□ 1.09
SNX17-202ENST00000427123 NRXN2Q9P2S2 1712 aa21.84■■□□□ 1.09
SNX17-202ENST00000427123 KLRF2D3W0D1 207 aa21.84■■□□□ 1.09
SNX17-202ENST00000427123 GTPBP6O43824 516 aaPredicted RBP21.84■■□□□ 1.09
SNX17-202ENST00000427123 PARP1P09874 1014 aaKnown RBP21.84■■□□□ 1.09
SNX17-202ENST00000427123 HSP90AA4PQ58FG1 418 aa21.84■■□□□ 1.09
SNX17-202ENST00000427123 RASGRP4Q8TDF6 673 aa21.84■■□□□ 1.09
SNX17-202ENST00000427123 PLIN4Q96Q06 1357 aa21.84■■□□□ 1.09
SNX17-202ENST00000427123 QTRT2Q9H974 415 aaKnown RBP21.84■■□□□ 1.09
SNX17-202ENST00000427123 TUBB4AP04350 444 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 CASP1P29466 404 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 KRT27Q7Z3Y8 459 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 KIF18AQ8NI77 898 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 CCDC12Q8WUD4 166 aaPredicted RBP21.83■■□□□ 1.09
SNX17-202ENST00000427123 SAMSN1Q9NSI8 373 aaKnown RBP21.83■■□□□ 1.09
SNX17-202ENST00000427123 MTMR7Q9Y216 660 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 SUGT1Q9Y2Z0 365 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 DAGLAQ9Y4D2 1042 aa21.83■■□□□ 1.09
SNX17-202ENST00000427123 MYH8P13535 1937 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 TRIM37O94972 964 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 CD44P16070 742 aaKnown RBP21.82■■□□□ 1.08
SNX17-202ENST00000427123 SMARCA1P28370 1054 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 NOVP48745 357 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 SPECC1LQ69YQ0 1117 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 FCHSD1Q86WN1 690 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms