RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 GPCPD1Q9NPB8 672 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
GINS3-203ENST00000426538 IQCA1LA6NCM1 817 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 CYTH3O43739 400 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 MMP1P03956 469 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
GINS3-203ENST00000426538 UBA5Q9GZZ9 404 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 SH2D4AQ9H788 454 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 VAT1LQ9HCJ6 419 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 SEC63Q9UGP8 760 aaKnown RBP17.44■□□□□ 0.38
GINS3-203ENST00000426538 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
GINS3-203ENST00000426538 KCTD1Q719H9 257 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 ZNF396Q96N95 335 aaPredicted RBP17.44■□□□□ 0.38
GINS3-203ENST00000426538 RIOX1Q9H6W3 641 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 GOPCQ9HD26 462 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 KCNJ14Q9UNX9 436 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 TMX2Q9Y320 296 aa17.44■□□□□ 0.38
GINS3-203ENST00000426538 BAZ2BQ9UIF8 2168 aaKnown RBP17.43■□□□□ 0.38
GINS3-203ENST00000426538 SKOR2Q2VWA4 1001 aaPredicted RBP17.43■□□□□ 0.38
GINS3-203ENST00000426538 ATL3Q6DD88 541 aa17.43■□□□□ 0.38
GINS3-203ENST00000426538 USP48Q86UV5 1035 aa17.43■□□□□ 0.38
GINS3-203ENST00000426538 ZC3H15Q8WU90 426 aaKnown RBP17.43■□□□□ 0.38
GINS3-203ENST00000426538 SCAND2PQ9GZW5 306 aaPredicted RBP17.43■□□□□ 0.38
GINS3-203ENST00000426538 CPVLQ9H3G5 476 aa17.43■□□□□ 0.38
GINS3-203ENST00000426538 GDPD2Q9HCC8 539 aa17.43■□□□□ 0.38
GINS3-203ENST00000426538 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
GINS3-203ENST00000426538 LMBRD1Q9NUN5 540 aa17.43■□□□□ 0.38
GINS3-203ENST00000426538 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
GINS3-203ENST00000426538 FIBPO43427 364 aa17.42■□□□□ 0.38
GINS3-203ENST00000426538 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
GINS3-203ENST00000426538 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
GINS3-203ENST00000426538 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
GINS3-203ENST00000426538 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
GINS3-203ENST00000426538 SH3GLB2Q9NR46 395 aa17.42■□□□□ 0.38
GINS3-203ENST00000426538 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
GINS3-203ENST00000426538 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 TRAK2O60296 914 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 NDUFB10O96000 172 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 U2AF2P26368 475 aaKnown RBP eCLIP17.41■□□□□ 0.38
GINS3-203ENST00000426538 ECE1P42892 770 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 NLRP5P59047 1200 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 KRT26Q7Z3Y9 468 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 ACER1Q8TDN7 264 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 PHF20Q9BVI0 1012 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
GINS3-203ENST00000426538 TCHHQ07283 1943 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 POLR2AP24928 1970 aaKnown RBP17.41■□□□□ 0.38
GINS3-203ENST00000426538 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 KIF28PB7ZC32 967 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 BMP3P12645 472 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 SLC35G1Q2M3R5 365 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
GINS3-203ENST00000426538 TTBK2Q6IQ55 1244 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 HEATR3Q7Z4Q2 680 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 PNMA8AQ86V59 439 aaPredicted RBP17.41■□□□□ 0.38
GINS3-203ENST00000426538 ADGRF4Q8IZF3 695 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 PIGSQ96S52 555 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 WRNIP1Q96S55 665 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 ZNF112Q9UJU3 913 aa17.41■□□□□ 0.38
GINS3-203ENST00000426538 CALML3P27482 149 aa17.4■□□□□ 0.38
GINS3-203ENST00000426538 INPP5BP32019 993 aa17.4■□□□□ 0.38
GINS3-203ENST00000426538 KRT2P35908 639 aa17.4■□□□□ 0.38
GINS3-203ENST00000426538 IKQ13123 557 aaPredicted RBP17.4■□□□□ 0.38
GINS3-203ENST00000426538 CCDC148Q8NFR7 591 aa17.4■□□□□ 0.38
GINS3-203ENST00000426538 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
GINS3-203ENST00000426538 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
GINS3-203ENST00000426538 PICK1Q9NRD5 415 aa17.4■□□□□ 0.38
GINS3-203ENST00000426538 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
GINS3-203ENST00000426538 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
GINS3-203ENST00000426538 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
GINS3-203ENST00000426538 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
GINS3-203ENST00000426538 SLC16A2P36021 539 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 NOSTRINQ8IVI9 506 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 FAM177A1Q8N128 213 aaPredicted RBP17.39■□□□□ 0.37
GINS3-203ENST00000426538 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 GPKOWQ92917 476 aaPredicted RBP eCLIP17.39■□□□□ 0.37
GINS3-203ENST00000426538 FEZ1Q99689 392 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 JMJD4Q9H9V9 463 aa17.39■□□□□ 0.37
GINS3-203ENST00000426538 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 CEBPZQ03701 1054 aaKnown RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 KLRG1Q96E93 195 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 SCN4AP35499 1836 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 PNMA6FA0A0J9YX94 578 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 NF2P35240 595 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 PRKG1Q13976 671 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 WWC2Q6AWC2 1192 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms