RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
HDAC6-206ENST00000426196 MSRAQ9UJ68 235 aa17.28■□□□□ 0.36
HDAC6-206ENST00000426196 GRXCR1A8MXD5 290 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 FLOT1O75955 427 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 SLC25A27O95847 323 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 RAB30Q15771 203 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 TNNI3KQ59H18 835 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 TMEM240Q5SV17 173 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-206ENST00000426196 MMP19Q99542 508 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 TINF2Q9BSI4 451 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 TBX21Q9UL17 535 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 FPGT-TNNI3KV9GXZ4 949 aa17.27■□□□□ 0.36
HDAC6-206ENST00000426196 TRANK1O15050 2925 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 A0A1W2PRG0 241 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 MOXD2PA6NHM9 499 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 GNAI2P04899 355 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 POLR3DP05423 398 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-206ENST00000426196 CT47B1P0C2W7 299 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-206ENST00000426196 ACLYP53396 1101 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 ADGRE1Q14246 886 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 PSRC1Q6PGN9 363 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-206ENST00000426196 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-206ENST00000426196 TMEM199Q8N511 208 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 ATG4CQ96DT6 458 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 HCN4Q9Y3Q4 1203 aa17.26■□□□□ 0.35
HDAC6-206ENST00000426196 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
HDAC6-206ENST00000426196 APBB1O00213 710 aa17.25■□□□□ 0.35
HDAC6-206ENST00000426196 PLCD1P51178 756 aa17.25■□□□□ 0.35
HDAC6-206ENST00000426196 OS9Q13438 667 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-206ENST00000426196 KCTD2Q14681 263 aa17.25■□□□□ 0.35
HDAC6-206ENST00000426196 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
HDAC6-206ENST00000426196 MAGEB6Q8N7X4 407 aa17.25■□□□□ 0.35
HDAC6-206ENST00000426196 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-206ENST00000426196 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
HDAC6-206ENST00000426196 CXXC1Q9P0U4 656 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-206ENST00000426196 DIS3Q9Y2L1 958 aaKnown RBP17.25■□□□□ 0.35
HDAC6-206ENST00000426196 SYNRGQ9UMZ2 1314 aa17.24■□□□□ 0.35
HDAC6-206ENST00000426196 PGK2P07205 417 aa17.24■□□□□ 0.35
HDAC6-206ENST00000426196 ZNF865P0CJ78 1059 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-206ENST00000426196 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-206ENST00000426196 AAK1Q2M2I8 961 aa17.24■□□□□ 0.35
HDAC6-206ENST00000426196 GLT1D1Q96MS3 346 aa17.24■□□□□ 0.35
HDAC6-206ENST00000426196 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
HDAC6-206ENST00000426196 SLC28A3Q9HAS3 691 aa17.24■□□□□ 0.35
HDAC6-206ENST00000426196 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
HDAC6-206ENST00000426196 CSF2RAP15509 400 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 TMEM132BQ14DG7 1078 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 TMED8Q6PL24 325 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-206ENST00000426196 TMEM179Q6ZVK1 233 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 ZNF365Q70YC5 407 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 C16orf59Q7L2K0 433 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 NECAB3Q96P71 396 aaPredicted RBP17.23■□□□□ 0.35
HDAC6-206ENST00000426196 ARHGEF10LQ9HCE6 1279 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 MUC6Q6W4X9 2439 aa17.23■□□□□ 0.35
HDAC6-206ENST00000426196 PRRC2BQ5JSZ5 2229 aaKnown RBP17.23■□□□□ 0.35
HDAC6-206ENST00000426196 ELP1O95163 1332 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 SYNGAP1Q96PV0 1343 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 ACRP10323 421 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 GABPAQ06546 454 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 KCNA10Q16322 511 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 KIAA1755Q5JYT7 1200 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 RIOX2Q8IUF8 465 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 VTI1AQ96AJ9 217 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 FAM184BQ9ULE4 1060 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 MCM3APO60318 1980 aa17.22■□□□□ 0.35
HDAC6-206ENST00000426196 WDR46O15213 610 aaKnown RBP17.21■□□□□ 0.35
HDAC6-206ENST00000426196 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.35
HDAC6-206ENST00000426196 COPB2P35606 906 aa17.21■□□□□ 0.35
HDAC6-206ENST00000426196 MICALL1Q8N3F8 863 aa17.21■□□□□ 0.35
HDAC6-206ENST00000426196 PCSK9Q8NBP7 692 aaKnown RBP17.21■□□□□ 0.35
HDAC6-206ENST00000426196 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
HDAC6-206ENST00000426196 PPP1R12CQ9BZL4 782 aa17.21■□□□□ 0.35
HDAC6-206ENST00000426196 BMP1P13497 986 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 ICA1Q05084 483 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
HDAC6-206ENST00000426196 HERVK_113Q902F9 699 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
HDAC6-206ENST00000426196 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 SPC25Q9HBM1 224 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 IL23AQ9NPF7 189 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 MCM9Q9NXL9 1143 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 DBNLQ9UJU6 430 aaKnown RBP17.2■□□□□ 0.34
HDAC6-206ENST00000426196 TMX2Q9Y320 296 aa17.2■□□□□ 0.34
HDAC6-206ENST00000426196 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 ARVCFO00192 962 aa17.19■□□□□ 0.34
HDAC6-206ENST00000426196 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 C6orf222P0C671 652 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 CST5P28325 142 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 STAT3P40763 770 aa17.19■□□□□ 0.34
HDAC6-206ENST00000426196 CDK7P50613 346 aa17.19■□□□□ 0.34
HDAC6-206ENST00000426196 SKIV2LQ15477 1246 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms