RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 PCDHA7Q9UN72 937 aa20.01■□□□□ 0.79
FN1-208ENST00000426059 MARCKSP29966 332 aaPredicted RBP20■□□□□ 0.79
FN1-208ENST00000426059 TOB1P50616 345 aaPredicted RBP20■□□□□ 0.79
FN1-208ENST00000426059 ZNF280AP59817 542 aaPredicted RBP20■□□□□ 0.79
FN1-208ENST00000426059 CABP5Q9NP86 173 aa20■□□□□ 0.79
FN1-208ENST00000426059 FRMD4AQ9P2Q2 1039 aaPredicted RBP20■□□□□ 0.79
FN1-208ENST00000426059 NLRP5P59047 1200 aa20■□□□□ 0.79
FN1-208ENST00000426059 TTBK2Q6IQ55 1244 aa20■□□□□ 0.79
FN1-208ENST00000426059 HEATR3Q7Z4Q2 680 aa20■□□□□ 0.79
FN1-208ENST00000426059 ISY1Q9ULR0 285 aaKnown RBP20■□□□□ 0.79
FN1-208ENST00000426059 FSD2A1L4K1 749 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 NR1I2O75469 434 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 RPS12P25398 132 aaKnown RBP19.99■□□□□ 0.79
FN1-208ENST00000426059 KRT2P35908 639 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 NASPP49321 788 aaPredicted RBP19.99■□□□□ 0.79
FN1-208ENST00000426059 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 DACT1Q9NYF0 836 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 SPTLC2O15270 562 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 ZNF445P59923 1031 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 ICA1Q05084 483 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 CAMK4Q16566 473 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
FN1-208ENST00000426059 PIGSQ96S52 555 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 GOLPH3LQ9H4A5 285 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 KANSL2Q9H9L4 492 aa19.99■□□□□ 0.79
FN1-208ENST00000426059 COL2A1P02458 1487 aaPredicted RBP19.98■□□□□ 0.79
FN1-208ENST00000426059 SLC16A2P36021 539 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 RASA3Q14644 834 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 TMEM179Q6ZVK1 233 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 HERC5Q9UII4 1024 aaKnown RBP19.98■□□□□ 0.79
FN1-208ENST00000426059 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 CCDC96Q2M329 555 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 CCDC183Q5T5S1 534 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 CCAR1Q8IX12 1150 aaKnown RBP19.98■□□□□ 0.79
FN1-208ENST00000426059 SPZ1Q9BXG8 430 aa19.98■□□□□ 0.79
FN1-208ENST00000426059 YEATS4O95619 227 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 FAM83AQ86UY5 434 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 DPF2Q92785 391 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 LZTS2Q9BRK4 669 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 PCDHB6Q9Y5E3 794 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 LMNB1P20700 586 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 ZNF543Q08ER8 600 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 PTPAQ15257 358 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 FKBP1CQ5VVH2 108 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 RASGRP4Q8TDF6 673 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 PGAP2Q9UHJ9 254 aa19.97■□□□□ 0.79
FN1-208ENST00000426059 SBF1O95248 1867 aa19.96■□□□□ 0.79
FN1-208ENST00000426059 WNT7AO00755 349 aa19.96■□□□□ 0.79
FN1-208ENST00000426059 YBX3P16989 372 aaKnown RBP eCLIP19.96■□□□□ 0.797e-82■□□□□ 8.6
FN1-208ENST00000426059 SLC39A14Q15043 492 aa19.96■□□□□ 0.79
FN1-208ENST00000426059 KCNG4Q8TDN1 519 aa19.96■□□□□ 0.79
FN1-208ENST00000426059 NYAP2Q9P242 653 aa19.96■□□□□ 0.79
FN1-208ENST00000426059 HACL1Q9UJ83 578 aa19.96■□□□□ 0.79
FN1-208ENST00000426059 KIF4BQ2VIQ3 1234 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 ASPRV1Q53RT3 343 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 RRP36Q96EU6 259 aaKnown RBP19.95■□□□□ 0.78
FN1-208ENST00000426059 NUP88Q99567 741 aaPredicted RBP19.95■□□□□ 0.78
FN1-208ENST00000426059 A0A1W2PRG0 241 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 STXBP3O00186 592 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 TNFRSF25Q93038 417 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 MKL1Q969V6 931 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 RIOX1Q9H6W3 641 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 BRMS1Q9HCU9 246 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 MRVI1Q9Y6F6 885 aa19.95■□□□□ 0.78
FN1-208ENST00000426059 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.94■□□□□ 0.78
FN1-208ENST00000426059 A0A1B0GVL5 298 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 ECE1P42892 770 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 LRSAM1Q6UWE0 723 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 PIK3AP1Q6ZUJ8 805 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 CCDC84Q86UT8 332 aaPredicted RBP19.94■□□□□ 0.78
FN1-208ENST00000426059 FSIP1Q8NA03 581 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 BARHL2Q9NY43 387 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 RILPL1Q5EBL4 403 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 SLFN13Q68D06 897 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 ADALQ6DHV7 355 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 ADGRF4Q8IZF3 695 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 CLIC6Q96NY7 704 aa19.94■□□□□ 0.78
FN1-208ENST00000426059 SEC63Q9UGP8 760 aaKnown RBP19.94■□□□□ 0.78
FN1-208ENST00000426059 DICER1Q9UPY3 1922 aaKnown RBP19.93■□□□□ 0.78
FN1-208ENST00000426059 F5H6K3 240 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 SLC1A4P43007 532 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 KLRC3Q07444 240 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 PRAMEF18Q5VWM3 479 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 SPICE1Q8N0Z3 855 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 EPS15P42566 896 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 TNNI2P48788 182 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 NAPAP54920 295 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 AXDND1Q5T1B0 1012 aaPredicted RBP19.93■□□□□ 0.78
FN1-208ENST00000426059 BLIDQ8IZY5 108 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 ACER1Q8TDN7 264 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 COA7Q96BR5 231 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 TEPSINQ96N21 525 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 JMJD4Q9H9V9 463 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 GRPEL1Q9HAV7 217 aa19.93■□□□□ 0.78
FN1-208ENST00000426059 USP17L10C9JJH3 530 aa19.92■□□□□ 0.78
FN1-208ENST00000426059 XRCC6P12956 609 aaKnown RBP eCLIP19.92■□□□□ 0.78
FN1-208ENST00000426059 CKAP2LQ8IYA6 745 aa19.92■□□□□ 0.78
FN1-208ENST00000426059 NUP62CLQ9H1M0 184 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms