RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 USP17L5A8MUK1 530 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 DEXIO95424 95 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
CALD1-206ENST00000424922 MAP3K10Q02779 954 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 NBPF12Q5TAG4 269 aaPredicted RBP17.32■□□□□ 0.36
CALD1-206ENST00000424922 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 WASF1Q92558 559 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 NYAP2Q9P242 653 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 CNTNAP5Q8WYK1 1306 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 PALM3A6NDB9 673 aaPredicted RBP17.32■□□□□ 0.36
CALD1-206ENST00000424922 PRPF3O43395 683 aaKnown RBP17.32■□□□□ 0.36
CALD1-206ENST00000424922 RRP9O43818 475 aaKnown RBP17.32■□□□□ 0.36
CALD1-206ENST00000424922 PDHBP11177 359 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 PRAMEF18Q5VWM3 479 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 SIAH1Q8IUQ4 282 aa17.32■□□□□ 0.36
CALD1-206ENST00000424922 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
CALD1-206ENST00000424922 SCN4AP35499 1836 aa17.31■□□□□ 0.36
CALD1-206ENST00000424922 GNAQP50148 359 aa17.31■□□□□ 0.36
CALD1-206ENST00000424922 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
CALD1-206ENST00000424922 L3MBTL3Q96JM7 780 aaPredicted RBP17.31■□□□□ 0.36
CALD1-206ENST00000424922 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
CALD1-206ENST00000424922 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 KLRF2D3W0D1 207 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 CAP2P40123 477 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 PKN1Q16512 942 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 MKL1Q969V6 931 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 RAD21O60216 631 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 RESTQ13127 1097 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 TRIM29Q14134 588 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 KRT40Q6A162 431 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
CALD1-206ENST00000424922 FRMPD2Q68DX3 1309 aaPredicted RBP17.3■□□□□ 0.36
CALD1-206ENST00000424922 PHF20L1A8MW92 1017 aa17.29■□□□□ 0.36
CALD1-206ENST00000424922 CPVLQ9H3G5 476 aa17.29■□□□□ 0.36
CALD1-206ENST00000424922 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
CALD1-206ENST00000424922 SNHG28P0DPA3 235 aa17.29■□□□□ 0.36
CALD1-206ENST00000424922 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
CALD1-206ENST00000424922 LZTS2Q9BRK4 669 aa17.29■□□□□ 0.36
CALD1-206ENST00000424922 FUCA2Q9BTY2 467 aa17.29■□□□□ 0.36
CALD1-206ENST00000424922 PITPNM2Q9BZ72 1349 aa17.28■□□□□ 0.36
CALD1-206ENST00000424922 CYTH3O43739 400 aa17.28■□□□□ 0.36
CALD1-206ENST00000424922 DOCK1Q14185 1865 aa17.27■□□□□ 0.36
CALD1-206ENST00000424922 EPHX2P34913 555 aa17.27■□□□□ 0.36
CALD1-206ENST00000424922 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.36
CALD1-206ENST00000424922 RGS22Q8NE09 1264 aa17.27■□□□□ 0.36
CALD1-206ENST00000424922 DCPSQ96C86 337 aaKnown RBP17.27■□□□□ 0.36
CALD1-206ENST00000424922 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.36
CALD1-206ENST00000424922 PPP2R3BQ9Y5P8 575 aa17.27■□□□□ 0.36
CALD1-206ENST00000424922 A0A1W2PRG0 241 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 ZNF543Q08ER8 600 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 CCDC96Q2M329 555 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 DCAF15Q66K64 600 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 ATL3Q6DD88 541 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 LEO1Q8WVC0 666 aaPredicted RBP17.27■□□□□ 0.35
CALD1-206ENST00000424922 SPATA32Q96LK8 384 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 UBA5Q9GZZ9 404 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.35
CALD1-206ENST00000424922 ASNSP08243 561 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 SCG2P13521 617 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
CALD1-206ENST00000424922 ECE1P42892 770 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 SLFN13Q68D06 897 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 SPZ1Q9BXG8 430 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 KIF28PB7ZC32 967 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 F5H6K3 240 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 XBP1P17861 261 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
CALD1-206ENST00000424922 KLRC3Q07444 240 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
CALD1-206ENST00000424922 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
CALD1-206ENST00000424922 ACER1Q8TDN7 264 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 SHISA4Q96DD7 197 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 ZNF341Q9BYN7 854 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 CFAP45Q9UL16 551 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 FZD1Q9UP38 647 aa17.26■□□□□ 0.35
CALD1-206ENST00000424922 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
CALD1-206ENST00000424922 MMP1P03956 469 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 SLC1A4P43007 532 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 DLK2Q6UY11 383 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 CCDC84Q86UT8 332 aaPredicted RBP17.25■□□□□ 0.35
CALD1-206ENST00000424922 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 GMCL1P1Q8NEA9 526 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 CCDC39Q9UFE4 941 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 NOL7Q9UMY1 257 aaKnown RBP17.25■□□□□ 0.35
CALD1-206ENST00000424922 WDR90Q96KV7 1748 aa17.25■□□□□ 0.35
CALD1-206ENST00000424922 SMARCA1P28370 1054 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 INPP5BP32019 993 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 GNL2Q13823 731 aaKnown RBP17.24■□□□□ 0.35
CALD1-206ENST00000424922 GPATCH4Q5T3I0 446 aaKnown RBP17.24■□□□□ 0.35
CALD1-206ENST00000424922 DCAF4Q8WV16 495 aa17.24■□□□□ 0.35
CALD1-206ENST00000424922 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms