RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 NYAP2Q9P242 653 aa19.35■□□□□ 0.69
DDR1-234ENST00000424544 ADORA2AP29274 412 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 ATP2B2Q01814 1243 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 WDR78Q5VTH9 848 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 REPS2Q8NFH8 660 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 MKL1Q969V6 931 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 SEC62Q99442 399 aaKnown RBP19.34■□□□□ 0.69
DDR1-234ENST00000424544 GDF15Q99988 308 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 CWC22Q9HCG8 908 aaKnown RBP19.34■□□□□ 0.69
DDR1-234ENST00000424544 FBXO28Q9NVF7 368 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 PARP14Q460N5 1801 aa19.34■□□□□ 0.69
DDR1-234ENST00000424544 A0A1W2PPC1 479 aa19.33■□□□□ 0.68
DDR1-234ENST00000424544 ERC2O15083 957 aa19.33■□□□□ 0.68
DDR1-234ENST00000424544 CYP2C19P33261 490 aa19.33■□□□□ 0.68
DDR1-234ENST00000424544 ZMYM1Q5SVZ6 1142 aa19.33■□□□□ 0.68
DDR1-234ENST00000424544 IFNL3Q8IZI9 196 aa19.33■□□□□ 0.68
DDR1-234ENST00000424544 MINDY4BA8MYZ0 360 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 VWA5AO00534 786 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 CYBAP13498 195 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 BMP8BP34820 402 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 DPP9Q86TI2 863 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 RIOX2Q8IUF8 465 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
DDR1-234ENST00000424544 MKNK2Q9HBH9 465 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 DDX20Q9UHI6 824 aaKnown RBP19.32■□□□□ 0.68
DDR1-234ENST00000424544 ZNF214Q9UL59 606 aaPredicted RBP19.32■□□□□ 0.68
DDR1-234ENST00000424544 PPP1R9AQ9ULJ8 1098 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 ZNF236Q9UL36 1845 aa19.32■□□□□ 0.68
DDR1-234ENST00000424544 F5H6K3 240 aa19.31■□□□□ 0.68
DDR1-234ENST00000424544 MSCO60682 206 aa19.31■□□□□ 0.68
DDR1-234ENST00000424544 SLC25A27O95847 323 aa19.31■□□□□ 0.68
DDR1-234ENST00000424544 MX1P20591 662 aa19.31■□□□□ 0.68
DDR1-234ENST00000424544 KLRC3Q07444 240 aa19.31■□□□□ 0.68
DDR1-234ENST00000424544 LRRFIP1Q32MZ4 808 aaKnown RBP19.31■□□□□ 0.68
DDR1-234ENST00000424544 GOPCQ9HD26 462 aa19.31■□□□□ 0.68
DDR1-234ENST00000424544 HDAC1Q13547 482 aaPredicted RBP19.3■□□□□ 0.68
DDR1-234ENST00000424544 NCAPG2Q86XI2 1143 aa19.3■□□□□ 0.68
DDR1-234ENST00000424544 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
DDR1-234ENST00000424544 SYNPO2Q9UMS6 1093 aa19.3■□□□□ 0.68
DDR1-234ENST00000424544 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
DDR1-234ENST00000424544 FOXP2O15409 715 aa19.29■□□□□ 0.68
DDR1-234ENST00000424544 STAT3P40763 770 aa19.29■□□□□ 0.68
DDR1-234ENST00000424544 PLS1Q14651 629 aa19.29■□□□□ 0.68
DDR1-234ENST00000424544 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
DDR1-234ENST00000424544 MAML3Q96JK9 1138 aa19.29■□□□□ 0.68
DDR1-234ENST00000424544 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
DDR1-234ENST00000424544 NDUFB10O96000 172 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 IGHDP01880 384 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 FCER1AP12319 257 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 LRRC26Q2I0M4 334 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 C7orf61Q8IZ16 206 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 ZNF444Q8N0Y2 327 aaPredicted RBP19.28■□□□□ 0.68
DDR1-234ENST00000424544 STK11IPQ8N1F8 1099 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 NEDD1Q8NHV4 660 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 ZNF287Q9HBT7 754 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 SLC5A4Q9NY91 659 aa19.28■□□□□ 0.68
DDR1-234ENST00000424544 DIS3Q9Y2L1 958 aaKnown RBP19.28■□□□□ 0.68
DDR1-234ENST00000424544 ATP2A1O14983 1001 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 SEPT4O43236 478 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 PRDM1O75626 825 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 APPP05067 770 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 TDO2P48775 406 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 ANKRD45Q5TZF3 282 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.68
DDR1-234ENST00000424544 SLF1Q9BQI6 1058 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 FSD1Q9BTV5 496 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 CLIP2Q9UDT6 1046 aa19.27■□□□□ 0.68
DDR1-234ENST00000424544 ZMYND8Q9ULU4 1186 aaPredicted RBP19.27■□□□□ 0.68
DDR1-234ENST00000424544 COL11A1P12107 1806 aaPredicted RBP19.27■□□□□ 0.68
DDR1-234ENST00000424544 DNM1LO00429 736 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 CNGA1P29973 690 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 PDE1AP54750 535 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 PRAMEF19Q5SWL8 479 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 TICAM2Q86XR7 235 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 PRPF38AQ8NAV1 312 aaKnown RBP19.26■□□□□ 0.67
DDR1-234ENST00000424544 NACAP1Q9BZK3 213 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 NRBP1Q9UHY1 535 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 RIPK3Q9Y572 518 aa19.26■□□□□ 0.67
DDR1-234ENST00000424544 FRMPD3Q5JV73 1810 aa19.25■□□□□ 0.67
DDR1-234ENST00000424544 SMCHD1A6NHR9 2005 aa19.25■□□□□ 0.67
DDR1-234ENST00000424544 PLIN4Q96Q06 1357 aa19.25■□□□□ 0.67
DDR1-234ENST00000424544 FGRP09769 529 aa19.25■□□□□ 0.67
DDR1-234ENST00000424544 PPARAQ07869 468 aa19.25■□□□□ 0.67
DDR1-234ENST00000424544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.25■□□□□ 0.67
DDR1-234ENST00000424544 GMCL1P1Q8NEA9 526 aa19.25■□□□□ 0.67
DDR1-234ENST00000424544 SOX1O00570 391 aaPredicted RBP19.24■□□□□ 0.67
DDR1-234ENST00000424544 TTLL1O95922 423 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 COPB2P35606 906 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 MAGEA10P43363 369 aaPredicted RBP19.24■□□□□ 0.67
DDR1-234ENST00000424544 NOVP48745 357 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 ARRDC4Q8NCT1 418 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 EVI5LQ96CN4 794 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 MMP19Q99542 508 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 TINF2Q9BSI4 451 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 TEX13BQ9BXU2 312 aa19.24■□□□□ 0.67
DDR1-234ENST00000424544 SENP6Q9GZR1 1112 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms