RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 LENG1Q96BZ8 264 aaPredicted RBP14.05□□□□□ -0.16
TRBV22-1-201ENST00000424543 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRBV22-1-201ENST00000424543 LRRCC1Q9C099 1032 aa14.05□□□□□ -0.16
TRBV22-1-201ENST00000424543 HOXC10Q9NYD6 342 aa14.05□□□□□ -0.16
TRBV22-1-201ENST00000424543 ATP11BQ9Y2G3 1177 aa14.05□□□□□ -0.16
TRBV22-1-201ENST00000424543 WDR46O15213 610 aaKnown RBP14.04□□□□□ -0.16
TRBV22-1-201ENST00000424543 UBE3CQ15386 1083 aa14.04□□□□□ -0.16
TRBV22-1-201ENST00000424543 FAM47AQ5JRC9 791 aa14.04□□□□□ -0.16
TRBV22-1-201ENST00000424543 SHCBP1Q8NEM2 672 aa14.04□□□□□ -0.16
TRBV22-1-201ENST00000424543 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
TRBV22-1-201ENST00000424543 PRUNE2Q8WUY3 3088 aa14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 DNM1LO00429 736 aa14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 TAL1P17542 331 aaPredicted RBP14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 OLFML2BQ68BL8 750 aa14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 SLC17A8Q8NDX2 589 aa14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 MAML3Q96JK9 1138 aa14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 EPB41L4AQ9HCS5 686 aaPredicted RBP14.03□□□□□ -0.16
TRBV22-1-201ENST00000424543 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 M0R2C6 588 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 RASA1P20936 1047 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 LRIT3Q3SXY7 679 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 TRIM60Q495X7 471 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 MB21D1Q8N884 522 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 OSBP2Q969R2 916 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 CHMP4CQ96CF2 233 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 FAM161BQ96MY7 647 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 STRBPQ96SI9 672 aaKnown RBP14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 MMP19Q99542 508 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 PRDM5Q9NQX1 630 aaPredicted RBP14.02□□□□□ -0.17
TRBV22-1-201ENST00000424543 GSG1L2A8MUP6 293 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 SEPT4O43236 478 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 STRNO43815 780 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 MSCO60682 206 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 PRDM1O75626 825 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 FCER1AP12319 257 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 ADCYAP1R1P41586 468 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 LRRC41Q15345 812 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 SH3RF1Q7Z6J0 888 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 REPS2Q8NFH8 660 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 OTUD7AQ8TE49 926 aaPredicted RBP14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 DDRGK1Q96HY6 314 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 CCDC17Q96LX7 622 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 MROH8Q9H579 483 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 ZNF214Q9UL59 606 aaPredicted RBP14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
TRBV22-1-201ENST00000424543 KBTBD13C9JR72 458 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 VWA5AO00534 786 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 PGK1P00558 417 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 SEC62Q99442 399 aaKnown RBP14□□□□□ -0.17
TRBV22-1-201ENST00000424543 KANSL2Q9H9L4 492 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 GOPCQ9HD26 462 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 MTMR10Q9NXD2 777 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 ARPP21Q9UBL0 812 aaPredicted RBP14□□□□□ -0.17
TRBV22-1-201ENST00000424543 ADAMTS5Q9UNA0 930 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 RIPK3Q9Y572 518 aa14□□□□□ -0.17
TRBV22-1-201ENST00000424543 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 GPAA1O43292 621 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 NDUFB10O96000 172 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 STAT3P40763 770 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 ZSCAN25Q6NSZ9 544 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 RIOX2Q8IUF8 465 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 LRRC47Q8N1G4 583 aaKnown RBP13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 LBHD1Q9BQE6 289 aaPredicted RBP13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 LCTP09848 1927 aa13.99□□□□□ -0.17
TRBV22-1-201ENST00000424543 ROBO3Q96MS0 1386 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 TRIM43BA6NCK2 446 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 DLL1O00548 723 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 SLC25A27O95847 323 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 ZNF792Q3KQV3 632 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 SNRNP48Q6IEG0 339 aaKnown RBP13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 ABRAQ8N0Z2 381 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 ARRDC4Q8NCT1 418 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 APPBP2Q92624 585 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 BADQ92934 168 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 TRIM43Q96BQ3 446 aaPredicted RBP13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 MKNK2Q9HBH9 465 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 XPNPEP3Q9NQH7 507 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 VCANP13611 3396 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 LRRC37A2A6NM11 1700 aa13.98□□□□□ -0.17
TRBV22-1-201ENST00000424543 RNF113AO15541 343 aaKnown RBP13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 ZNF865P0CJ78 1059 aaPredicted RBP13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 ITGB8P26012 769 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 TDO2P48775 406 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 KCTD2Q14681 263 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 SHHQ15465 462 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 SBK1Q52WX2 424 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 RASGRP2Q7LDG7 609 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 GUCD1Q96NT3 240 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
TRBV22-1-201ENST00000424543 TINF2Q9BSI4 451 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms