RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 PNMA3Q9UL41 463 aa19.94■□□□□ 0.78
FOXN4-203ENST00000423960 WDR19Q8NEZ3 1342 aa19.94■□□□□ 0.78
FOXN4-203ENST00000423960 CASTP20810 708 aaKnown RBP19.93■□□□□ 0.78
FOXN4-203ENST00000423960 PNMA1Q8ND90 353 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 GMCL1Q96IK5 515 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 LRRC2Q9BYS8 371 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 C22orf23Q9BZE7 217 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 ASCC2Q9H1I8 757 aaPredicted RBP19.93■□□□□ 0.78
FOXN4-203ENST00000423960 ZFYVE28Q9HCC9 887 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 ZSWIM6Q9HCJ5 1215 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 MTMR7Q9Y216 660 aa19.93■□□□□ 0.78
FOXN4-203ENST00000423960 SH2B2O14492 632 aaPredicted RBP19.92■□□□□ 0.78
FOXN4-203ENST00000423960 CPA1P15085 419 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 RPS6KB1P23443 525 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 SLC1A4P43007 532 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 IRX3P78415 501 aaPredicted RBP19.92■□□□□ 0.78
FOXN4-203ENST00000423960 FAM83BQ5T0W9 1011 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 CHMP4CQ96CF2 233 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 PARK7Q99497 189 aaKnown RBP19.92■□□□□ 0.78
FOXN4-203ENST00000423960 NUP88Q99567 741 aaPredicted RBP19.92■□□□□ 0.78
FOXN4-203ENST00000423960 TANGO6Q9C0B7 1094 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 LY9Q9HBG7 655 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 GPHNQ9NQX3 736 aaPredicted RBP19.92■□□□□ 0.78
FOXN4-203ENST00000423960 CYP46A1Q9Y6A2 500 aa19.92■□□□□ 0.78
FOXN4-203ENST00000423960 CYP2C8P10632 490 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 BMP3P12645 472 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 LIFRP42702 1097 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 COG2Q14746 738 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 RUFY3Q7L099 469 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 DCAF4Q8WV16 495 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 IL17RAQ96F46 866 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 TCEANC2Q96MN5 208 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 P2RX7Q99572 595 aaKnown RBP19.91■□□□□ 0.78
FOXN4-203ENST00000423960 SENP2Q9HC62 589 aa19.91■□□□□ 0.78
FOXN4-203ENST00000423960 FGD1P98174 961 aa19.9■□□□□ 0.78
FOXN4-203ENST00000423960 NFXL1Q6ZNB6 911 aa19.9■□□□□ 0.78
FOXN4-203ENST00000423960 HOXC10Q9NYD6 342 aa19.9■□□□□ 0.78
FOXN4-203ENST00000423960 ISY1Q9ULR0 285 aaKnown RBP19.9■□□□□ 0.78
FOXN4-203ENST00000423960 PTPRFP10586 1907 aa19.9■□□□□ 0.78
FOXN4-203ENST00000423960 CCDC69A6NI79 296 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 TLR2O60603 784 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 FLOT1O75955 427 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 PDHBP11177 359 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 RBM25P49756 843 aaKnown RBP19.89■□□□□ 0.77
FOXN4-203ENST00000423960 CCDC96Q2M329 555 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 CATIPQ7Z7H3 387 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 SMCR8Q8TEV9 937 aaPredicted RBP19.89■□□□□ 0.77
FOXN4-203ENST00000423960 UPF3BQ9BZI7 483 aaKnown RBP19.89■□□□□ 0.77
FOXN4-203ENST00000423960 FEM1BQ9UK73 627 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 HPS5Q9UPZ3 1129 aa19.89■□□□□ 0.77
FOXN4-203ENST00000423960 LOC285556D6RIA3 1793 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 SNHG28P0DPA3 235 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 HERVK_113P62684 666 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 PKN2Q16513 984 aaKnown RBP19.88■□□□□ 0.77
FOXN4-203ENST00000423960 Q6ZUG5 572 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 KCTD1Q719H9 257 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 CD99L2Q8TCZ2 262 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 FBXO28Q9NVF7 368 aa19.88■□□□□ 0.77
FOXN4-203ENST00000423960 MYH4Q9Y623 1939 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 TMEM232C9JQI7 657 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 DSG3P32926 999 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 GCLCP48506 637 aaPredicted RBP19.87■□□□□ 0.77
FOXN4-203ENST00000423960 SAMD1Q6SPF0 538 aaPredicted RBP19.87■□□□□ 0.77
FOXN4-203ENST00000423960 RASGRP2Q7LDG7 609 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 SGMS1Q86VZ5 419 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 FBXL16Q8N461 479 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 GTF3C2Q8WUA4 911 aaPredicted RBP19.87■□□□□ 0.77
FOXN4-203ENST00000423960 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 TRIM17Q9Y577 477 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 SLC12A7Q9Y666 1083 aa19.87■□□□□ 0.77
FOXN4-203ENST00000423960 FRMPD2Q68DX3 1309 aaPredicted RBP19.86■□□□□ 0.77
FOXN4-203ENST00000423960 PLA2G6O60733 806 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 SP3Q02447 781 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 ZNF543Q08ER8 600 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 TROAPQ12815 778 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 IKQ13123 557 aaPredicted RBP19.86■□□□□ 0.77
FOXN4-203ENST00000423960 GPATCH4Q5T3I0 446 aaKnown RBP19.86■□□□□ 0.77
FOXN4-203ENST00000423960 C17orf99Q6UX52 265 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 FAM160B2Q86V87 743 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 ZNF654Q8IZM8 581 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 PRPF38AQ8NAV1 312 aaKnown RBP19.86■□□□□ 0.77
FOXN4-203ENST00000423960 SLF1Q9BQI6 1058 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 CPA4Q9UI42 421 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 PPP1R9AQ9ULJ8 1098 aa19.86■□□□□ 0.77
FOXN4-203ENST00000423960 MYPNQ86TC9 1320 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 ADGRA2Q96PE1 1338 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 SPDYE16A6NNV3 312 aaPredicted RBP19.85■□□□□ 0.77
FOXN4-203ENST00000423960 PARP1P09874 1014 aaKnown RBP19.85■□□□□ 0.77
FOXN4-203ENST00000423960 STAT2P52630 851 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 SOX10P56693 466 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 ASPRV1Q53RT3 343 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 TTBK2Q6IQ55 1244 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 FBXO46Q6PJ61 603 aaPredicted RBP19.85■□□□□ 0.77
FOXN4-203ENST00000423960 LBX2Q6XYB7 198 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 OTOP1Q7RTM1 612 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 NUP133Q8WUM0 1156 aa19.85■□□□□ 0.77
FOXN4-203ENST00000423960 BRF1Q92994 677 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms