RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
CHD7-201ENST00000423902 USP25Q9UHP3 1055 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 VWA3AA6NCI4 1184 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 NEMFO60524 1076 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 MRPS9P82933 396 aaKnown RBP9.39□□□□□ -0.91
CHD7-201ENST00000423902 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 AKT3Q9Y243 479 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 KBTBD13C9JR72 458 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
CHD7-201ENST00000423902 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 OTUD5Q96G74 571 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 MYH3P11055 1940 aa9.39□□□□□ -0.91
CHD7-201ENST00000423902 CETPP11597 493 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 SFPQP23246 707 aaKnown RBP eCLIP9.38□□□□□ -0.911e-6■■■■■ 32.9
CHD7-201ENST00000423902 HUNKP57058 714 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 DHX58Q96C10 678 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 TTC38Q5R3I4 469 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 FAM227BQ96M60 508 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 SCARF1Q14162 830 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 SPC24Q8NBT2 197 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 E7EWF7 191 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 H7C1W4 665 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 PLSCR1O15162 318 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 DDX12PQ92771 950 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 MRPL44Q9H9J2 332 aaKnown RBP9.38□□□□□ -0.91
CHD7-201ENST00000423902 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
CHD7-201ENST00000423902 PRR16Q569H4 304 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 SMC1BQ8NDV3 1235 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 TMX3Q96JJ7 454 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 SLF1Q9BQI6 1058 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 ZMYND15Q9H091 742 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 MYOZ2Q9NPC6 264 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 ADD2P35612 726 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 DEKP35659 375 aaKnown RBP9.38□□□□□ -0.91
CHD7-201ENST00000423902 MRPS27Q92552 414 aaKnown RBP9.38□□□□□ -0.91
CHD7-201ENST00000423902 GCNAQ96QF7 691 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 TDRD3Q9H7E2 651 aaKnown RBP9.38□□□□□ -0.91
CHD7-201ENST00000423902 DDX25Q9UHL0 483 aaKnown RBP9.38□□□□□ -0.91
CHD7-201ENST00000423902 FTOQ9C0B1 505 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD7-201ENST00000423902 ZNF174Q15697 407 aa9.38□□□□□ -0.91
CHD7-201ENST00000423902 EZRP15311 586 aaKnown RBP9.37□□□□□ -0.91
CHD7-201ENST00000423902 TXKP42681 527 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 AK2P54819 239 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 KDM6AO15550 1401 aaPredicted RBP9.37□□□□□ -0.91
CHD7-201ENST00000423902 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 PUS3Q9BZE2 481 aaKnown RBP9.37□□□□□ -0.91
CHD7-201ENST00000423902 MYCT1Q8N699 235 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
CHD7-201ENST00000423902 SIGLEC1Q9BZZ2 1709 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 POLA2Q14181 598 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 TEX35Q5T0J7 233 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 GH2P01242 217 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 BIRC2Q13490 618 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 DLG5Q8TDM6 1919 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 C19orf81C9J6K1 198 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 N4BP3O15049 544 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 SGSM2O43147 1006 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 ZSCAN12O43309 604 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 PLA2G4DQ86XP0 818 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 PCDHA12Q9UN75 941 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 KIF28PB7ZC32 967 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 GTF2A2P52657 109 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 CCDC102AQ96A19 550 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 MAK16Q9BXY0 300 aaKnown RBP9.37□□□□□ -0.91
CHD7-201ENST00000423902 KIF5CO60282 957 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 SNX29Q8TEQ0 813 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 RNF34Q969K3 372 aa9.37□□□□□ -0.91
CHD7-201ENST00000423902 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 CCDC112Q8NEF3 446 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 MROH7-TTC4A0A0A0MT08 1334 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 GMPSP49915 693 aaPredicted RBP9.36□□□□□ -0.91
CHD7-201ENST00000423902 TTLL4Q14679 1199 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 SUGCTQ9HAC7 445 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 NDUFB9Q9Y6M9 179 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L15C9J2P7 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L13C9JLJ4 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L11C9JVI0 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L18D6R9N7 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L22D6RA61 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L17D6RBQ6 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L19D6RCP7 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L20D6RJB6 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 USP17L24Q0WX57 530 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
CHD7-201ENST00000423902 COL23A1Q86Y22 540 aaPredicted RBP9.36□□□□□ -0.91
CHD7-201ENST00000423902 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 EAF2Q96CJ1 260 aaPredicted RBP9.36□□□□□ -0.91
CHD7-201ENST00000423902 ISCA1Q9BUE6 129 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 TNKSO95271 1327 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 GSTTP1A0A1W2PQM5 241 aa9.36□□□□□ -0.91
CHD7-201ENST00000423902 HSPD1P10809 573 aaKnown RBP9.36□□□□□ -0.91
CHD7-201ENST00000423902 FCGRTP55899 365 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms