RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 RAB3GAP1Q15042 981 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 PI16Q6UXB8 463 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 ZNF365Q70YC5 407 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 KCNH6Q9H252 994 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 SH2D4AQ9H788 454 aa8.12□□□□□ -1.11
PMS1-208ENST00000421722 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
PMS1-208ENST00000421722 E9PSI1 815 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 DUSP11O75319 330 aaKnown RBP8.11□□□□□ -1.11
PMS1-208ENST00000421722 PGK1P00558 417 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 FGBP02675 491 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 CT47B1P0C2W7 299 aaPredicted RBP8.11□□□□□ -1.11
PMS1-208ENST00000421722 SHMT1P34896 483 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 USP5P45974 858 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 CCDC85BQ15834 202 aaPredicted RBP8.11□□□□□ -1.11
PMS1-208ENST00000421722 CCDC158Q5M9N0 1113 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 TTC39AQ5SRH9 613 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 ZNF467Q7Z7K2 595 aaPredicted RBP8.11□□□□□ -1.11
PMS1-208ENST00000421722 GLT1D1Q96MS3 346 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 TANGO6Q9C0B7 1094 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 EPHX3Q9H6B9 360 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 SLC28A3Q9HAS3 691 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 MRS2Q9HD23 443 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 ADAMTS5Q9UNA0 930 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 CNPY2Q9Y2B0 182 aa8.11□□□□□ -1.11
PMS1-208ENST00000421722 GRXCR1A8MXD5 290 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 TLL1O43897 1013 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 CYP7A1P22680 504 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 G3BP1Q13283 466 aaKnown RBP eCLIP8.1□□□□□ -1.11
PMS1-208ENST00000421722 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
PMS1-208ENST00000421722 ADGRA1Q86SQ6 560 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 SPC25Q9HBM1 224 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 ZNFX1Q9P2E3 1918 aaKnown RBP8.1□□□□□ -1.11
PMS1-208ENST00000421722 SYNRGQ9UMZ2 1314 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 LRRC37A2A6NM11 1700 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 PI4K2BG5E9Z4 385 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 WDR46O15213 610 aaKnown RBP8.1□□□□□ -1.11
PMS1-208ENST00000421722 SRGAP3O43295 1099 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 GTPBP6O43824 516 aaPredicted RBP8.1□□□□□ -1.11
PMS1-208ENST00000421722 CD4P01730 458 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 DYNLL1P63167 89 aaKnown RBP8.1□□□□□ -1.11
PMS1-208ENST00000421722 GABPAQ06546 454 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 KCTD2Q14681 263 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 KCNA10Q16322 511 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 RPUSD2Q8IZ73 545 aaKnown RBP8.1□□□□□ -1.11
PMS1-208ENST00000421722 SLC43A3Q8NBI5 491 aa8.1□□□□□ -1.11
PMS1-208ENST00000421722 YBX2Q9Y2T7 364 aaKnown RBP8.1□□□□□ -1.11
PMS1-208ENST00000421722 CABYRO75952 493 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 CYP2E1P05181 493 aaPredicted RBP8.09□□□□□ -1.11
PMS1-208ENST00000421722 CSF2RAP15509 400 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 GJA9P57773 515 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 SEPT2Q15019 361 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 TMEM179Q6ZVK1 233 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 FAM126BQ8IXS8 530 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 NECAB3Q96P71 396 aaPredicted RBP8.09□□□□□ -1.11
PMS1-208ENST00000421722 ARHGEF10LQ9HCE6 1279 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 SWAP70Q9UH65 585 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 PARP14Q460N5 1801 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 PFKMP08237 780 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
PMS1-208ENST00000421722 PLS1Q14651 629 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 MAGEB6Q8N7X4 407 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 VCPKMTQ9H867 229 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 SMC4Q9NTJ3 1288 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 TMX2Q9Y320 296 aa8.09□□□□□ -1.11
PMS1-208ENST00000421722 A0A1W2PRG0 241 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 FLOT1O75955 427 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 TMEM132BQ14DG7 1078 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 PPP2R2DQ66LE6 453 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 ARHGAP45Q92619 1136 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 MEIS3Q99687 375 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 PIH1D3Q9NQM4 214 aaKnown RBP8.08□□□□□ -1.12
PMS1-208ENST00000421722 MTCH2Q9Y6C9 303 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 SLC4A7Q9Y6M7 1214 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 PRR33A8MZF0 331 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 POLR3DP05423 398 aaPredicted RBP8.08□□□□□ -1.12
PMS1-208ENST00000421722 ACRP10323 421 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 STAT3P40763 770 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
PMS1-208ENST00000421722 CCDC17Q96LX7 622 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 SNRKQ9NRH2 765 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 LMCD1Q9NZU5 365 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.08□□□□□ -1.12
PMS1-208ENST00000421722 NAV1Q8NEY1 1877 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 GBF1Q92538 1859 aa8.08□□□□□ -1.12
PMS1-208ENST00000421722 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 SNAI1O95863 264 aaPredicted RBP8.07□□□□□ -1.12
PMS1-208ENST00000421722 ZAP70P43403 619 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 KCNQ1P51787 676 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 SLFN5Q08AF3 891 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 TNNI3KQ59H18 835 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 REPS2Q8NFH8 660 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 PHOSPHO2Q8TCD6 241 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
PMS1-208ENST00000421722 FPGT-TNNI3KV9GXZ4 949 aa8.07□□□□□ -1.12
PMS1-208ENST00000421722 ASGR1P07306 291 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 CYP2C18P33260 490 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 RFC2P35250 354 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms