RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 IGKV6D-41A0A0C4DH26 115 aa20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 SLC15A5A6NIM6 579 aa20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 HIP1O00291 1037 aa20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 RANBP6O60518 1105 aaKnown RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 SGPL1O95470 568 aa20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 TFRCP02786 760 aaKnown RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 HSPD1P10809 573 aaKnown RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 TRIM32Q13049 653 aa20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 ALX1Q15699 326 aa20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 CWC27Q6UX04 472 aaKnown RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 NUP88Q99567 741 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 HMX1Q9NP08 348 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 CTDP1Q9Y5B0 961 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP3-203ENST00000421450 NDUFB10O96000 172 aa20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 FGAP02671 866 aa20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 ERCC3P19447 782 aa20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 PPP4R3BQ5MIZ7 849 aa20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 LRRC47Q8N1G4 583 aaKnown RBP20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 SHISA4Q96DD7 197 aa20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 INCENPQ9NQS7 918 aa20.85■□□□□ 0.93
TNFAIP3-203ENST00000421450 RLFQ13129 1914 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 RPTORQ8N122 1335 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 CCL14Q16627 93 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 RRP12Q5JTH9 1297 aaKnown RBP20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 DPP9Q86TI2 863 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 SHCBP1Q8NEM2 672 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 USP6NLQ92738 828 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 MKL1Q969V6 931 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 SLF1Q9BQI6 1058 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 ANAPC4Q9UJX5 808 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 PPP1R9AQ9ULJ8 1098 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 STX8Q9UNK0 236 aa20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
TNFAIP3-203ENST00000421450 PRKAR2AP13861 404 aaKnown RBP20.83■□□□□ 0.93
TNFAIP3-203ENST00000421450 PDE4AP27815 886 aa20.83■□□□□ 0.93
TNFAIP3-203ENST00000421450 HAND2P61296 217 aa20.83■□□□□ 0.93
TNFAIP3-203ENST00000421450 MROH8Q9H579 483 aa20.83■□□□□ 0.93
TNFAIP3-203ENST00000421450 PAK6Q9NQU5 681 aaPredicted RBP20.83■□□□□ 0.93
TNFAIP3-203ENST00000421450 PLIN4Q96Q06 1357 aa20.83■□□□□ 0.92
TNFAIP3-203ENST00000421450 VWA5AO00534 786 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 STRNO43815 780 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 FARP2O94887 1054 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 GRB14Q14449 540 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 TMEM132BQ14DG7 1078 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 PRPF38BQ5VTL8 546 aaKnown RBP20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 MFSD14CQ5VZR4 134 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 SLFN13Q68D06 897 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 CHMP4CQ96CF2 233 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 PARP14Q460N5 1801 aa20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 TNRC18O15417 2968 aaPredicted RBP20.82■□□□□ 0.92
TNFAIP3-203ENST00000421450 A0A0G2JMZ2 1700 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 SLC25A27O95847 323 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 ADORA2AP29274 412 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 STAT3P40763 770 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 SLC4A3P48751 1232 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 IKQ13123 557 aaPredicted RBP20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 TTC22Q5TAA0 569 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 PRPF38AQ8NAV1 312 aaKnown RBP20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 SLC5A4Q9NY91 659 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 SYNPO2Q9UMS6 1093 aa20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
TNFAIP3-203ENST00000421450 ZMYM6O95789 1325 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 ORC4O43929 436 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 NMT2O60551 498 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 ZBED4O75132 1171 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 FCER1AP12319 257 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 CAPN2P17655 700 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 CACNB2Q08289 660 aaPredicted RBP20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 MFSD6Q6ZSS7 791 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 GMCL1P1Q8NEA9 526 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 FEM1BQ9UK73 627 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 ADAMTS5Q9UNA0 930 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 MTMR7Q9Y216 660 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 TACC3Q9Y6A5 838 aa20.8■□□□□ 0.92
TNFAIP3-203ENST00000421450 ZNF213O14771 459 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 BMP3P12645 472 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 RIOX2Q8IUF8 465 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 CPXCR1Q8N123 301 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 NPLOC4Q8TAT6 608 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 DPF3Q92784 378 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 HTATIP2Q9BUP3 242 aa20.79■□□□□ 0.92
TNFAIP3-203ENST00000421450 TMEM232C9JQI7 657 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 HOXC6P09630 235 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 COPB2P35606 906 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 SLC1A4P43007 532 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 KCTD2Q14681 263 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 MAP3K21Q5TCX8 1036 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 MMP19Q99542 508 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 IL17RBQ9NRM6 502 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 FLRT1Q9NZU1 646 aa20.78■□□□□ 0.92
TNFAIP3-203ENST00000421450 FGRP09769 529 aa20.77■□□□□ 0.92
TNFAIP3-203ENST00000421450 GSPT1P15170 499 aaKnown RBP20.77■□□□□ 0.92
TNFAIP3-203ENST00000421450 MCCP23508 829 aa20.77■□□□□ 0.92
TNFAIP3-203ENST00000421450 CNGA1P29973 690 aa20.77■□□□□ 0.92
TNFAIP3-203ENST00000421450 CCND3P30281 292 aaPredicted RBP20.77■□□□□ 0.92
TNFAIP3-203ENST00000421450 AKNAD1Q5T1N1 836 aa20.77■□□□□ 0.92
TNFAIP3-203ENST00000421450 SNRNP48Q6IEG0 339 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms