RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 NAA15Q9BXJ9 866 aaKnown RBP9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 ZNF446Q9NWS9 450 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 FAM205AQ6ZU69 1335 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 C10orf71Q711Q0 1435 aa9.91□□□□□ -0.82
TRIM49D1-201ENST00000420869 TEX33O43247 280 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 CALML3P27482 149 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 CASP1P29466 404 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 KIF5BP33176 963 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 AFMP43652 599 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 ERCC6LQ2NKX8 1250 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 HSP90AA4PQ58FG1 418 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 FAM47AQ5JRC9 791 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 C12orf60Q5U649 245 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 SPTY2D1Q68D10 685 aaPredicted RBP9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 C15orf52Q6ZUT6 534 aaKnown RBP9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 TOGARAM2Q6ZUX3 1019 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 CTAGE1Q96RT6 745 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 MTRQ99707 1265 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 PRDM10Q9NQV6 1147 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 TCP11L1Q9NUJ3 509 aa9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 LIMA1Q9UHB6 759 aaKnown RBP9.9□□□□□ -0.82
TRIM49D1-201ENST00000420869 LRRC10BA6NIK2 292 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 EFCAB8A8MWE9 144 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 AKR1B15C9JRZ8 316 aaPredicted RBP9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 MFAP3LO75121 409 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 VEGFAP15692 232 aaPredicted RBP9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 LONP1P36776 959 aaKnown RBP9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 ADKP55263 362 aaKnown RBP9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 MAP3K9P80192 1104 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 VPS72Q15906 364 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 PIK3AP1Q6ZUJ8 805 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 TXNRD3Q86VQ6 643 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 BLIDQ8IZY5 108 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 IQUBQ8NA54 791 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 CCDC51Q96ER9 411 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 SETDB2Q96T68 719 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 IL17RBQ9NRM6 502 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 TFCP2L1Q9NZI6 479 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 SRP68Q9UHB9 627 aaKnown RBP9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 RWDD2AQ9UIY3 292 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 MRFAP1Q9Y605 127 aa9.9□□□□□ -0.83
TRIM49D1-201ENST00000420869 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 ZRANB2O95218 330 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 USP17L8P0C7I0 530 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 CLCN6P51797 869 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 NLRP5P59047 1200 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 PPP4CP60510 307 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 SEMA3FQ13275 785 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 SLC35G1Q2M3R5 365 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 CCDC178Q5BJE1 867 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 ZNF658Q5TYW1 1059 aaPredicted RBP9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 BICDL1Q6ZP65 573 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 KRT222Q8N1A0 295 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 WDR24Q96S15 920 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 MRPL44Q9H9J2 332 aaKnown RBP9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 MAD2L2Q9UI95 211 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 PCDHA4Q9UN74 947 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 CTNND2Q9UQB3 1225 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 SCN9AQ15858 1988 aa9.89□□□□□ -0.83
TRIM49D1-201ENST00000420869 SMCHD1A6NHR9 2005 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 GYPCP04921 128 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 SPAG1Q07617 926 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 GALNT17Q6IS24 598 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 RAD9BQ6WBX8 426 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 RSRC2Q7L4I2 434 aaKnown RBP9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 RASGRP2Q7LDG7 609 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 PTF1AQ7RTS3 328 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 DZIP1Q86YF9 867 aaKnown RBP9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 SMYD4Q8IYR2 804 aaPredicted RBP9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 IGSF22Q8N9C0 903 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 PNMA1Q8ND90 353 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 WDR66Q8TBY9 1149 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 KAT14Q9H8E8 782 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 MCM9Q9NXL9 1143 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 LEMD3Q9Y2U8 911 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
TRIM49D1-201ENST00000420869 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 PALM3A6NDB9 673 aaPredicted RBP9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 URI1O94763 535 aaPredicted RBP9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 TPM1P09493 284 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 CCDC175P0C221 793 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 GNAQP50148 359 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 KCNQ4P56696 695 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 STX17P56962 302 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 RBL2Q08999 1139 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 KCNB1Q14721 858 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 MTF1Q14872 753 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 KRT31Q15323 416 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 FAM98CQ17RN3 349 aaKnown RBP9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 FILIP1LQ4L180 1135 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 ARHGAP29Q52LW3 1261 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 NAALADL2Q58DX5 795 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 KLHL10Q6JEL2 608 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
TRIM49D1-201ENST00000420869 CNGA4Q8IV77 575 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms