RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 ZSWIM5Q9P217 1185 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 RBPJLQ9UBG7 517 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 PTPN22Q9Y2R2 807 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 TACC3Q9Y6A5 838 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 NEDD4P46934 1319 aa23.32■■□□□ 1.32
RPUSD3-202ENST00000418713 MYH4Q9Y623 1939 aa23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 LAMA4Q16363 1823 aa23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 SPDYE16A6NNV3 312 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 EPB41L2O43491 1005 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 FAM83BQ5T0W9 1011 aa23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 FAM160B2Q86V87 743 aa23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 ZSCAN10Q96SZ4 725 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-202ENST00000418713 ZKSCAN1P17029 563 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 KIAA1755Q5JYT7 1200 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 NBPF11Q86T75 865 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 LRRC47Q8N1G4 583 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 DCAF4Q8WV16 495 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 ANKS1AQ92625 1134 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 SLF1Q9BQI6 1058 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 TMEM47Q9BQJ4 181 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 SRRDQ9UH36 339 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 PPP1R9AQ9ULJ8 1098 aa23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 ISY1Q9ULR0 285 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-202ENST00000418713 E7EWF7 191 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 NMT2O60551 498 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 PLA2G6O60733 806 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 ZBED4O75132 1171 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 COPB2P35606 906 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 TRIM47Q96LD4 638 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 MTA3Q9BTC8 594 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 KAT14Q9H8E8 782 aa23.29■■□□□ 1.32
RPUSD3-202ENST00000418713 STAT2P52630 851 aa23.28■■□□□ 1.32
RPUSD3-202ENST00000418713 NECTIN1Q15223 517 aa23.28■■□□□ 1.32
RPUSD3-202ENST00000418713 RAET1EQ8TD07 263 aa23.28■■□□□ 1.32
RPUSD3-202ENST00000418713 ADAMTS5Q9UNA0 930 aa23.28■■□□□ 1.32
RPUSD3-202ENST00000418713 SLC25A27O95847 323 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 MCCP23508 829 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 IKQ13123 557 aaPredicted RBP23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 KRT32Q14532 448 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 CREB3L3Q68CJ9 461 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 SHCBP1Q8NEM2 672 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 TXNRD2Q9NNW7 524 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 IVNS1ABPQ9Y6Y0 642 aa23.27■■□□□ 1.32
RPUSD3-202ENST00000418713 TMEM232C9JQI7 657 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 SLC27A2O14975 620 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 STRNO43815 780 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 Q3C1V9 767 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 IFIT1BQ5T764 474 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 TMTC2Q8N394 836 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 SOCS4Q8WXH5 440 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 ABHD8Q96I13 439 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 ZKSCAN3Q9BRR0 538 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 MROH8Q9H579 483 aa23.26■■□□□ 1.31
RPUSD3-202ENST00000418713 VWA5AO00534 786 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 CAPN15O75808 1086 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 MCM5P33992 734 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 PLS1Q14651 629 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 GPATCH4Q5T3I0 446 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 PLEKHH3Q7Z736 793 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 NUDT12Q9BQG2 462 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 SPATC1LQ9H0A9 340 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 PNMA2Q9UL42 364 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 TNKSO95271 1327 aa23.25■■□□□ 1.31
RPUSD3-202ENST00000418713 IFIT3O14879 490 aaKnown RBP23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 OAZ1P54368 228 aa23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 CCDC96Q2M329 555 aa23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 TSGA10IPQ3SY00 556 aa23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 PNMA1Q8ND90 353 aa23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 KIFC2Q96AC6 838 aa23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 NUP88Q99567 741 aaPredicted RBP23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 BTBD7Q9P203 1132 aa23.24■■□□□ 1.31
RPUSD3-202ENST00000418713 CNMDO75829 334 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 HMGB1P09429 215 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 STAT3P40763 770 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 IRF5Q13568 498 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 SLC9C1Q4G0N8 1177 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 WDR78Q5VTH9 848 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 TRMT44Q8IYL2 757 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 ENAHQ8N8S7 591 aaPredicted RBP23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 SLC5A4Q9NY91 659 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 HPS5Q9UPZ3 1129 aa23.23■■□□□ 1.31
RPUSD3-202ENST00000418713 MGAMO43451 1857 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 ATP2A1O14983 1001 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 ECM2O94769 699 aaPredicted RBP23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 FLT3LGP49771 235 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 WTAPQ15007 396 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 GPR142Q7Z601 462 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 RIOX2Q8IUF8 465 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 SLAIN1Q8ND83 568 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 PXYLP1Q8TE99 480 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 FBXO28Q9NVF7 368 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 MTMR7Q9Y216 660 aa23.22■■□□□ 1.31
RPUSD3-202ENST00000418713 SLC15A5A6NIM6 579 aa23.21■■□□□ 1.31
RPUSD3-202ENST00000418713 CTGFP29279 349 aa23.21■■□□□ 1.31
RPUSD3-202ENST00000418713 PRKCZQ05513 592 aa23.21■■□□□ 1.31
RPUSD3-202ENST00000418713 KCTD1Q719H9 257 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms