RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 INF2Q27J81 1249 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
LIMK1-202ENST00000418310 GOLGA1Q92805 767 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 ERVK-24P63145 666 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-202ENST00000418310 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-202ENST00000418310 SRRTQ9BXP5 876 aaKnown RBP13.45□□□□□ -0.26
LIMK1-202ENST00000418310 ARFGAP3Q9NP61 516 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
LIMK1-202ENST00000418310 ITGB4P16144 1822 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 PHACTR2O75167 634 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 PAK1Q13153 545 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 NSUN4Q96CB9 384 aaKnown RBP13.44□□□□□ -0.26
LIMK1-202ENST00000418310 KAT14Q9H8E8 782 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 PRCPP42785 496 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 KCNJ12Q14500 433 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 NCAPH2Q6IBW4 605 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 TYW1BQ6NUM6 668 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 GDAP1L1Q96MZ0 367 aa13.44□□□□□ -0.26
LIMK1-202ENST00000418310 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
LIMK1-202ENST00000418310 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 ZRANB2O95218 330 aaKnown RBP eCLIP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 PMS1P54277 932 aaKnown RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 SPATA20Q8TB22 786 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 GSDMAQ96QA5 445 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 MKNK2Q9HBH9 465 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 CCDC194A0A1B0GVG4 234 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 HIBADHP31937 336 aaKnown RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 ATP2C1P98194 919 aaPredicted RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 SMC1AQ14683 1233 aaKnown RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 HPS3Q969F9 1004 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 CAPZA3Q96KX2 299 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 CHD4Q14839 1912 aa13.43□□□□□ -0.26
LIMK1-202ENST00000418310 RPN1P04843 607 aaKnown RBP13.43□□□□□ -0.26
LIMK1-202ENST00000418310 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 NBPF5PQ86XG9 351 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-202ENST00000418310 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 TRIM47Q96LD4 638 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 HDAC6Q9UBN7 1215 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 TUBB4AP04350 444 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 SKIDA1Q1XH10 827 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 MAPKAPK5Q8IW41 473 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
LIMK1-202ENST00000418310 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 PNKPQ96T60 521 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
LIMK1-202ENST00000418310 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
LIMK1-202ENST00000418310 MYO1BO43795 1136 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 SRGAP2O75044 1071 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 KLK7P49862 253 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
LIMK1-202ENST00000418310 GRIK5Q16478 980 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 LONRF2Q1L5Z9 754 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 ANKRD20A12PQ8NF67 263 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 TNFRSF25Q93038 417 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 PANX2Q96RD6 677 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 ABHD10Q9NUJ1 306 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 CTAGE9A4FU28 777 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 TXLNAP40222 546 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 UBA7P41226 1012 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
LIMK1-202ENST00000418310 CNGA4Q8IV77 575 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 TGFBRAP1Q8WUH2 860 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 CTAGE1Q96RT6 745 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 BRIP1Q9BX63 1249 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-202ENST00000418310 ANAPC4Q9UJX5 808 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 ZMYND10O75800 440 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 LETM2Q2VYF4 491 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 PDXDC2PQ6P474 469 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 AK7Q96M32 723 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 FAM53CQ9NYF3 392 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 ZNF804BA4D1E1 1349 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 MYH6P13533 1939 aa13.41□□□□□ -0.26
LIMK1-202ENST00000418310 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 CALM1P0DP23 149 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 CALM2P0DP24 149 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 CALM3P0DP25 149 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 E2F4Q16254 413 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 TCP11X2Q5H9J9 407 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 JAKMIP3Q5VZ66 844 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 RGS22Q8NE09 1264 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 B4DLN1 442 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 N4BP1O75113 896 aaKnown RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 DDAH1O94760 285 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms