RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RPN1P04843 607 aaKnown RBP13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 USP17L8P0C7I0 530 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 KLRK1P26718 216 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CDC25AP30304 524 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MED15Q96RN5 788 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RWDD2AQ9UIY3 292 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 FGRP09769 529 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TRIM14Q14142 442 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MRFAP1Q9Y605 127 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TIAM2Q8IVF5 1701 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 KCNJ18B7U540 433 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 WNT7AO00755 349 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GSTO1P78417 241 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 KCNJ12Q14500 433 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 KRT31Q15323 416 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TERF2Q15554 542 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CDKAL1Q5VV42 579 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 JAKMIP3Q5VZ66 844 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PCDHA4Q9UN74 947 aa13.2□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 COL14A1Q05707 1796 aaKnown RBP13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PSMA7O14818 248 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 KRT9P35527 623 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CEP112Q8N8E3 955 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TRIM47Q96LD4 638 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ZNF446Q9NWS9 450 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CCDC66A2RUB6 948 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GNPATO15228 680 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 COPB1P53618 953 aaKnown RBP13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GPS2Q13227 327 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 WDR66Q8TBY9 1149 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RASGRP4Q8TDF6 673 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 IRX2Q9BZI1 471 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LDHCP07864 332 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 XDHP47989 1333 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SLIT2O94813 1529 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DDX60Q8IY21 1712 aaKnown RBP13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RAD9BQ6WBX8 426 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PLIN2Q99541 437 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 H7C1D1 291 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SH3GLB2Q9NR46 395 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CHD4Q14839 1912 aa13.18□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TUBB2AQ13885 445 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TUBB2BQ9BVA1 445 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ZNHIT6Q9NWK9 470 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ERLIN1O75477 346 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SEC31AO94979 1220 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 EVX2Q03828 476 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 NPY5RQ15761 445 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 INF2Q27J81 1249 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GYPCP04921 128 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 NAPAP54920 295 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 TGFBRAP1Q8WUH2 860 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LIMA1Q9UHB6 759 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 FHOD1Q9Y613 1164 aa13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 COL1A1P02452 1464 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 ITIH6Q6UXX5 1313 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 NT5C2P49902 561 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 GALNT17Q6IS24 598 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
CSPG4P3Y-201ENST00000418188 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms