RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 ITGB8P26012 769 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 EPHB4P54760 987 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ICA1Q05084 483 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TMEM132BQ14DG7 1078 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 HSP90AB4PQ58FF6 505 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 RIOX2Q8IUF8 465 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SIAH1Q8IUQ4 282 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 NUP133Q8WUM0 1156 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 MMP19Q99542 508 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TSEN34Q9BSV6 310 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ADAMTS5Q9UNA0 930 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CNPY2Q9Y2B0 182 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 NAV1Q8NEY1 1877 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PLXNA1Q9UIW2 1896 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 A0A0G2JMZ2 1700 aa9.5□□□□□ -0.89
HLA-DPA1-241ENST00000417724 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PGK2P07205 417 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 AKR1A1P14550 325 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DNAJB2P25686 324 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 COPB2P35606 906 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 STAT3P40763 770 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 EVX2Q03828 476 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 FAAP100Q0VG06 881 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ZNF792Q3KQV3 632 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CCDC174Q6PII3 467 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 AMOTL1Q8IY63 956 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SLC44A5Q8NCS7 719 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 SDR42E1Q8WUS8 393 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DYNLL2Q96FJ2 89 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ZNF576Q9H609 170 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 KANSL2Q9H9L4 492 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 STARD7Q9NQZ5 370 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ATP8A2Q9NTI2 1148 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 EXOC6BQ9Y2D4 811 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ZNF532Q9HCE3 1301 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PARP14Q460N5 1801 aa9.49□□□□□ -0.89
HLA-DPA1-241ENST00000417724 GOLIM4O00461 696 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 VWA5AO00534 786 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TIMP1P01033 207 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ZNF865P0CJ78 1059 aaPredicted RBP9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CYP2D6P10635 497 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 AKR1B1P15121 316 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TAL1P17542 331 aaPredicted RBP9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ACLYP53396 1101 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CLASRPQ8N2M8 674 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 LCORLQ8N3X6 602 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 MSL3Q8N5Y2 521 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DDRGK1Q96HY6 314 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 FAM184BQ9ULE4 1060 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ROBO3Q96MS0 1386 aa9.48□□□□□ -0.89
HLA-DPA1-241ENST00000417724 BAZ2AQ9UIF9 1905 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TCRBV5S4A2TA0A5A2 114 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ADAMTS4O75173 837 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 EEF2P13639 858 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CDK8P49336 464 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PPIGQ13427 754 aaKnown RBP eCLIP9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 KCNA10Q16322 511 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 C12orf60Q5U649 245 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 MFSD5Q6N075 450 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CEP85Q6P2H3 762 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PCSK9Q8NBP7 692 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 VTI1AQ96AJ9 217 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 TIFAQ96CG3 184 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DDX11Q96FC9 970 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 GLT1D1Q96MS3 346 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 GAS2L1Q99501 681 aaPredicted RBP9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ARMT1Q9H993 441 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 IL1RAPL2Q9NP60 686 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 FBXO28Q9NVF7 368 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PPP1R9AQ9ULJ8 1098 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 NCOR1O75376 2440 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 ELP1O95163 1332 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 MROH7Q68CQ1 1323 aa9.47□□□□□ -0.89
HLA-DPA1-241ENST00000417724 PRUNE2Q8WUY3 3088 aa9.46□□□□□ -0.89
HLA-DPA1-241ENST00000417724 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 USP17L21D6R901 530 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CCER2I3L3R5 266 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PRKAB2O43741 272 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RAD21O60216 631 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 DUSP11O75319 330 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 IFIT2P09913 472 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MAMDC4Q6UXC1 1216 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CCDC129Q6ZRS4 1044 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 C16orf86Q6ZW13 317 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 TMEM199Q8N511 208 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 KLHDC9Q8NEP7 349 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ATXN2LQ8WWM7 1075 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms