RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 PDP2Q9P2J9 529 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 DUX4Q9UBX2 424 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 TARSL2A2RTX5 802 aaKnown RBP11.31□□□□□ -0.6
SATB1-204ENST00000417717 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
SATB1-204ENST00000417717 SASH1O94885 1247 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 MCF2P10911 925 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 EIF3BP55884 814 aaKnown RBP11.31□□□□□ -0.6
SATB1-204ENST00000417717 OPTNQ96CV9 577 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 SIKE1Q9BRV8 207 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 AMOTL2Q9Y2J4 779 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 DCTN3O75935 186 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 PDE6BP35913 854 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 AK2P54819 239 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 ARID5AQ03989 594 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 MCF2L2Q86YR7 1114 aa11.31□□□□□ -0.6
SATB1-204ENST00000417717 FNBP4Q8N3X1 1017 aaPredicted RBP11.31□□□□□ -0.6
SATB1-204ENST00000417717 MAPK13O15264 365 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 GNAT1P11488 350 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 RILPL1Q5EBL4 403 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 EGFL6Q8IUX8 553 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 RFWD2Q8NHY2 731 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 SPATA17Q96L03 361 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 KIFC3Q9BVG8 833 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 BIN2Q9UBW5 565 aaPredicted RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 MLH3Q9UHC1 1453 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 OR8K1Q8NGG5 319 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 NR1H4Q96RI1 486 aaPredicted RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 ATP10AO60312 1499 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 PMS1P54277 932 aaKnown RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 ANO5Q75V66 913 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 SESTD1Q86VW0 696 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 PALM2Q8IXS6 379 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 FAM186BQ8IYM0 893 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 FLCNQ8NFG4 579 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 C14orf93Q9H972 538 aaKnown RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 RNF14Q9UBS8 474 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 A0A1B0GVL5 298 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 TBCAO75347 108 aaKnown RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 ST13P50502 369 aaKnown RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 RNASE9P60153 205 aaKnown RBP11.3□□□□□ -0.6
SATB1-204ENST00000417717 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 TMEM154Q6P9G4 183 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 GPT2Q8TD30 523 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 PPP4R1Q8TF05 950 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 OMA1Q96E52 524 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 SGSM3Q96HU1 749 aa11.3□□□□□ -0.6
SATB1-204ENST00000417717 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 H0Y3Z8 333 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 ZNF213O14771 459 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 HDAC4P56524 1084 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 CWF19L2Q2TBE0 894 aaKnown RBP11.29□□□□□ -0.6
SATB1-204ENST00000417717 EP400NLQ6ZTU2 488 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 MAIP1Q8WWC4 291 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 DHX58Q96C10 678 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 IFIH1Q9BYX4 1025 aaKnown RBP11.29□□□□□ -0.6
SATB1-204ENST00000417717 ANGPTL3Q9Y5C1 460 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 TTC4O95801 387 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 CNGA1P29973 690 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 SERPINB4P48594 390 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
SATB1-204ENST00000417717 PDE1BQ01064 536 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 BIRC3Q13489 604 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 ANKRD35Q8N283 1001 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 ZNF229Q9UJW7 825 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
SATB1-204ENST00000417717 GIPC1O14908 333 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 TRIM63Q969Q1 353 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 CATSPER2Q96P56 530 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 GID8Q9NWU2 228 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 CROCC2H7BZ55 1655 aa11.29□□□□□ -0.6
SATB1-204ENST00000417717 STAT2P52630 851 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 CCDC89Q8N998 374 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 VPS16Q9H269 839 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 TRIM75PA6NK02 468 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 FAM200BP0CF97 657 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 ESRRAP11474 423 aaPredicted RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 KCNA3P22001 575 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
SATB1-204ENST00000417717 DMPKQ09013 629 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms