RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 CCDC183Q5T5S1 534 aa20.8■□□□□ 0.92
RTN4R-202ENST00000416372 KCNG4Q8TDN1 519 aa20.8■□□□□ 0.92
RTN4R-202ENST00000416372 CPVLQ9H3G5 476 aa20.8■□□□□ 0.92
RTN4R-202ENST00000416372 SH3GLB2Q9NR46 395 aa20.8■□□□□ 0.92
RTN4R-202ENST00000416372 VEGFAP15692 232 aaPredicted RBP20.8■□□□□ 0.92
RTN4R-202ENST00000416372 ICA1Q05084 483 aa20.8■□□□□ 0.92
RTN4R-202ENST00000416372 MKL1Q969V6 931 aa20.8■□□□□ 0.92
RTN4R-202ENST00000416372 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
RTN4R-202ENST00000416372 SPTLC2O15270 562 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 EGFRP00533 1210 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 GH2P01242 217 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 LIG1P18858 919 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 ZNF543Q08ER8 600 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 TBC1D10BQ4KMP7 808 aaPredicted RBP20.79■□□□□ 0.92
RTN4R-202ENST00000416372 SAMD7Q7Z3H4 446 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 GPKOWQ92917 476 aaPredicted RBP eCLIP20.79■□□□□ 0.92
RTN4R-202ENST00000416372 GPCPD1Q9NPB8 672 aa20.79■□□□□ 0.92
RTN4R-202ENST00000416372 DICER1Q9UPY3 1922 aaKnown RBP20.78■□□□□ 0.92
RTN4R-202ENST00000416372 SYCE3A1L190 88 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 CALML3P27482 149 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 RRP1BQ14684 758 aaKnown RBP20.78■□□□□ 0.92
RTN4R-202ENST00000416372 CCDC96Q2M329 555 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 RILPL1Q5EBL4 403 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 HEATR3Q7Z4Q2 680 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 SYT17Q9BSW7 474 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 UBA5Q9GZZ9 404 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 VAT1LQ9HCJ6 419 aa20.78■□□□□ 0.92
RTN4R-202ENST00000416372 SEC63Q9UGP8 760 aaKnown RBP20.78■□□□□ 0.92
RTN4R-202ENST00000416372 TNFAIP1Q13829 316 aa20.77■□□□□ 0.92
RTN4R-202ENST00000416372 SLC39A14Q15043 492 aa20.77■□□□□ 0.92
RTN4R-202ENST00000416372 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
RTN4R-202ENST00000416372 H7C1D1 291 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 TBC1D12O60347 775 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 JAG1P78504 1218 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 RASA3Q14644 834 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 NPY5RQ15761 445 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 KIF4BQ2VIQ3 1234 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 GPATCH4Q5T3I0 446 aaKnown RBP20.77■□□□□ 0.91
RTN4R-202ENST00000416372 WWC2Q6AWC2 1192 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 GAS2L3Q86XJ1 694 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 HOMER1Q86YM7 354 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 CDAN1Q8IWY9 1227 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 CCAR1Q8IX12 1150 aaKnown RBP20.77■□□□□ 0.91
RTN4R-202ENST00000416372 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.91
RTN4R-202ENST00000416372 RAD21O60216 631 aa20.76■□□□□ 0.91
RTN4R-202ENST00000416372 LETM1O95202 739 aaPredicted RBP20.76■□□□□ 0.91
RTN4R-202ENST00000416372 MIGA2Q7L4E1 593 aa20.76■□□□□ 0.91
RTN4R-202ENST00000416372 SIAH1Q8IUQ4 282 aa20.76■□□□□ 0.91
RTN4R-202ENST00000416372 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
RTN4R-202ENST00000416372 BARHL2Q9NY43 387 aa20.76■□□□□ 0.91
RTN4R-202ENST00000416372 PGAP2Q9UHJ9 254 aa20.76■□□□□ 0.91
RTN4R-202ENST00000416372 STXBP3O00186 592 aa20.75■□□□□ 0.91
RTN4R-202ENST00000416372 TOB1P50616 345 aaPredicted RBP20.75■□□□□ 0.91
RTN4R-202ENST00000416372 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
RTN4R-202ENST00000416372 JMYQ8N9B5 988 aa20.75■□□□□ 0.91
RTN4R-202ENST00000416372 DCAF4Q8WV16 495 aa20.75■□□□□ 0.91
RTN4R-202ENST00000416372 PIGSQ96S52 555 aa20.75■□□□□ 0.91
RTN4R-202ENST00000416372 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
RTN4R-202ENST00000416372 PTPAQ15257 358 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 SLFN13Q68D06 897 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 LRSAM1Q6UWE0 723 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 FAM177A1Q8N128 213 aaPredicted RBP20.74■□□□□ 0.91
RTN4R-202ENST00000416372 GPC2Q8N158 579 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 TNFRSF25Q93038 417 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 DDX19AQ9NUU7 478 aaKnown RBP20.74■□□□□ 0.91
RTN4R-202ENST00000416372 NOL7Q9UMY1 257 aaKnown RBP20.74■□□□□ 0.91
RTN4R-202ENST00000416372 SCAF8Q9UPN6 1271 aaKnown RBP20.74■□□□□ 0.91
RTN4R-202ENST00000416372 SBF1O95248 1867 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 ATP2B1P20020 1258 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 CCDC73Q6ZRK6 1079 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 KCTD1Q719H9 257 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 BLIDQ8IZY5 108 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 CCDC12Q8WUD4 166 aaPredicted RBP20.74■□□□□ 0.91
RTN4R-202ENST00000416372 RTN4Q9NQC3 1192 aaKnown RBP20.74■□□□□ 0.91
RTN4R-202ENST00000416372 HACL1Q9UJ83 578 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 PCDHA4Q9UN74 947 aa20.74■□□□□ 0.91
RTN4R-202ENST00000416372 A0A1W2PQ27 194 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 A0A1W2PQ64 194 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 A0A1W2PQD8 194 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 FAM205CA6NFA0 338 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 PPP6R2O75170 966 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 MARCKSP29966 332 aaPredicted RBP20.73■□□□□ 0.91
RTN4R-202ENST00000416372 SLC1A4P43007 532 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 NAPAP54920 295 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 TTBK2Q6IQ55 1244 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 GALNT17Q6IS24 598 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 TYW1BQ6NUM6 668 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 FSIP1Q8NA03 581 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 NUP62CLQ9H1M0 184 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 GPRC5DQ9NZD1 345 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 ZBTB21Q9ULJ3 1066 aa20.73■□□□□ 0.91
RTN4R-202ENST00000416372 ASTN2O75129 1339 aaPredicted RBP20.73■□□□□ 0.91
RTN4R-202ENST00000416372 F5H6K3 240 aa20.72■□□□□ 0.91
RTN4R-202ENST00000416372 NR1I2O75469 434 aa20.72■□□□□ 0.91
RTN4R-202ENST00000416372 MRE11P49959 708 aa20.72■□□□□ 0.91
RTN4R-202ENST00000416372 KLRC3Q07444 240 aa20.72■□□□□ 0.91
RTN4R-202ENST00000416372 EARS2Q5JPH6 523 aaKnown RBP20.72■□□□□ 0.91
RTN4R-202ENST00000416372 ADGRF4Q8IZF3 695 aa20.72■□□□□ 0.91
RTN4R-202ENST00000416372 GMCL1P1Q8NEA9 526 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms