RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 USP17L2Q6R6M4 530 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 KRT26Q7Z3Y9 468 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 NBPF11Q86T75 865 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 FBXO18Q8NFZ0 1043 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 MKL1Q969V6 931 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 FEZ1Q99689 392 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 PICK1Q9NRD5 415 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 SMARCA1P28370 1054 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 ZNF543Q08ER8 600 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 RRP1BQ14684 758 aaKnown RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 SHROOM1Q2M3G4 852 aaPredicted RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 PRAMEF18Q5VWM3 479 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 KRT40Q6A162 431 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 STAG2Q8N3U4 1231 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 GMCL1P1Q8NEA9 526 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 PIBF1Q8WXW3 757 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 RRP36Q96EU6 259 aaKnown RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 WRNIP1Q96S55 665 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 SPZ1Q9BXG8 430 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 GPCPD1Q9NPB8 672 aa11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
DEPDC4-203ENST00000416321 WDR90Q96KV7 1748 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 ADM5C9JUS6 153 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 F5H6K3 240 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 SCG2P13521 617 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 MCM4P33991 863 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 KLRC3Q07444 240 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 FUT2Q10981 343 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 IKQ13123 557 aaPredicted RBP11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 NBR1Q14596 966 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 SCYL3Q8IZE3 742 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
DEPDC4-203ENST00000416321 hCG_1642624A0A1W2PR95 340 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 PHF20L1A8MW92 1017 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 NDUFB10O96000 172 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 KRT85P78386 507 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 JAG1P78504 1218 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 DOCK1Q14185 1865 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 PFKFB3Q16875 520 aaPredicted RBP11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 CCDC148Q8NFR7 591 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 GMCL1Q96IK5 515 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 ZNF396Q96N95 335 aaPredicted RBP11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 VAT1LQ9HCJ6 419 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 TMX2Q9Y320 296 aa11.73□□□□□ -0.53
DEPDC4-203ENST00000416321 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 BMP3P12645 472 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 VEGFAP15692 232 aaPredicted RBP11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 CALML3P27482 149 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 INPP5BP32019 993 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 ECE1P42892 770 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 USP14P54578 494 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 NLRP5P59047 1200 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 RESTQ13127 1097 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 PRKG1Q13976 671 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 KCTD1Q719H9 257 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 HEATR3Q7Z4Q2 680 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 SIAH1Q8IUQ4 282 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 ACER1Q8TDN7 264 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 UBA5Q9GZZ9 404 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 VCPKMTQ9H867 229 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 VPS54Q9P1Q0 977 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 ZNF112Q9UJU3 913 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 CSADQ9Y600 493 aa11.72□□□□□ -0.53
DEPDC4-203ENST00000416321 A0A1W2PRG0 241 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 hCG_1984214I3L0E3 225 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 MMP1P03956 469 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 KRT2P35908 639 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 DNM1Q05193 864 aaKnown RBP11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 ZYXQ15942 572 aaKnown RBP11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 PKN1Q16512 942 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 DIS3L2Q8IYB7 885 aaKnown RBP11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 SPICE1Q8N0Z3 855 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 FAM177A1Q8N128 213 aaPredicted RBP11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 ZNF713Q8N859 430 aaPredicted RBP11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 KLRG1Q96E93 195 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 CDCA5Q96FF9 252 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms