RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
LINC01238-201ENST00000416204 ZNF236Q9UL36 1845 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 TRIM27P14373 513 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 SLC4A3P48751 1232 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 TRMT2AQ8IZ69 625 aaKnown RBP11.38□□□□□ -0.59
LINC01238-201ENST00000416204 SDR42E1Q8WUS8 393 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 ASB2Q96Q27 587 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
LINC01238-201ENST00000416204 PPP1R12CQ9BZL4 782 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 MROH8Q9H579 483 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
LINC01238-201ENST00000416204 MAGEB6P1A0A0J9YX57 407 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 DCDC2CA8MYV0 355 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 APBB1O00213 710 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 ZNF865P0CJ78 1059 aaPredicted RBP11.37□□□□□ -0.59
LINC01238-201ENST00000416204 AKR1B1P15121 316 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 CSF2RAP15509 400 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 PLA2G5P39877 138 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 ACLYP53396 1101 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 MAP3K12Q12852 859 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 KCNA10Q16322 511 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 VTI1AQ96AJ9 217 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 EAF2Q96CJ1 260 aaPredicted RBP11.37□□□□□ -0.59
LINC01238-201ENST00000416204 FAM122AQ96E09 287 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
LINC01238-201ENST00000416204 TINF2Q9BSI4 451 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 NKX2-4Q9H2Z4 354 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 GPR108Q9NPR9 543 aa11.37□□□□□ -0.59
LINC01238-201ENST00000416204 ZHX1Q9UKY1 873 aaPredicted RBP11.37□□□□□ -0.59
LINC01238-201ENST00000416204 SYNRGQ9UMZ2 1314 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 A0A0G2JMZ2 1700 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 CYP2D7A0A087X1C5 515 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 ADAMTS4O75173 837 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 TIMP1P01033 207 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 ICA1Q05084 483 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 GABPAQ06546 454 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 POLA2Q14181 598 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 ZNF792Q3KQV3 632 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 SLFNL1Q499Z3 407 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 ZNF365Q70YC5 407 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 ABRAQ8N0Z2 381 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 TMEM57Q8N5G2 664 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 ATXN2LQ8WWM7 1075 aaKnown RBP11.36□□□□□ -0.59
LINC01238-201ENST00000416204 TBX21Q9UL17 535 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 SMCHD1A6NHR9 2005 aa11.36□□□□□ -0.59
LINC01238-201ENST00000416204 PRKAB2O43741 272 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 AKR1A1P14550 325 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 CYP2C18P33260 490 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 MRPS5P82675 430 aaKnown RBP11.35□□□□□ -0.59
LINC01238-201ENST00000416204 TFF2Q03403 129 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 KCTD2Q14681 263 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 MFSD5Q6N075 450 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 LCORLQ8N3X6 602 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 MB21D1Q8N884 522 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
LINC01238-201ENST00000416204 CXXC1Q9P0U4 656 aaPredicted RBP11.35□□□□□ -0.59
LINC01238-201ENST00000416204 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
LINC01238-201ENST00000416204 ADCY6O43306 1168 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
LINC01238-201ENST00000416204 MYOGP15173 224 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 PDE6AP16499 860 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 PTGS1P23219 599 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 RABGGTBP53611 331 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 ATP8B2P98198 1209 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01238-201ENST00000416204 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 AACSQ86V21 672 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 SSH3Q8TE77 659 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 ARHGAP45Q92619 1136 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 NUP88Q99567 741 aaPredicted RBP11.34□□□□□ -0.59
LINC01238-201ENST00000416204 CRNKL1Q9BZJ0 848 aaKnown RBP11.34□□□□□ -0.59
LINC01238-201ENST00000416204 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 ARHGEF10LQ9HCE6 1279 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 YBX2Q9Y2T7 364 aaKnown RBP11.34□□□□□ -0.59
LINC01238-201ENST00000416204 NAV1Q8NEY1 1877 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 PLXNA1Q9UIW2 1896 aa11.34□□□□□ -0.59
LINC01238-201ENST00000416204 SLC25A27O95847 323 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
LINC01238-201ENST00000416204 CHGBP05060 677 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 C6orf222P0C671 652 aaPredicted RBP11.33□□□□□ -0.6
LINC01238-201ENST00000416204 EEF2P13639 858 aaKnown RBP11.33□□□□□ -0.6
LINC01238-201ENST00000416204 STAT3P40763 770 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 KCNQ1P51787 676 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 FAM83BQ5T0W9 1011 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 STK11IPQ8N1F8 1099 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 TOX2Q96NM4 488 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms