RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 PDGFAP04085 211 aa4.51□□□□□ -1.69
APP-207ENST00000415997 RAB6AP20340 208 aa4.51□□□□□ -1.69
APP-207ENST00000415997 MSMPQ1L6U9 139 aa4.51□□□□□ -1.69
APP-207ENST00000415997 EXOSC6Q5RKV6 272 aaKnown RBP4.51□□□□□ -1.69
APP-207ENST00000415997 DUSP27Q5VZP5 1158 aa4.51□□□□□ -1.69
APP-207ENST00000415997 VN1R5Q7Z5H4 357 aa4.51□□□□□ -1.69
APP-207ENST00000415997 NLGN1Q8N2Q7 840 aa4.51□□□□□ -1.69
APP-207ENST00000415997 TMEM102Q8N9M5 508 aaPredicted RBP4.51□□□□□ -1.69
APP-207ENST00000415997 SMG8Q8ND04 991 aaKnown RBP4.51□□□□□ -1.69
APP-207ENST00000415997 SYTL4Q96C24 671 aaPredicted RBP4.51□□□□□ -1.69
APP-207ENST00000415997 METTL22Q9BUU2 404 aaPredicted RBP4.51□□□□□ -1.69
APP-207ENST00000415997 CHRDQ9H2X0 955 aa4.51□□□□□ -1.69
APP-207ENST00000415997 LGR6Q9HBX8 967 aa4.51□□□□□ -1.69
APP-207ENST00000415997 SCN4AP35499 1836 aa4.51□□□□□ -1.69
APP-207ENST00000415997 CENPFP49454 3210 aa4.5□□□□□ -1.69
APP-207ENST00000415997 IQCA1LA6NCM1 817 aa4.5□□□□□ -1.69
APP-207ENST00000415997 DDNO94850 711 aaPredicted RBP4.5□□□□□ -1.69
APP-207ENST00000415997 ATG7O95352 703 aa4.5□□□□□ -1.69
APP-207ENST00000415997 TIAF1O95411 115 aa4.5□□□□□ -1.69
APP-207ENST00000415997 C8AP07357 584 aa4.5□□□□□ -1.69
APP-207ENST00000415997 NFICP08651 508 aa4.5□□□□□ -1.69
APP-207ENST00000415997 GYS1P13807 737 aa4.5□□□□□ -1.69
APP-207ENST00000415997 CHRNA5P30532 468 aa4.5□□□□□ -1.69
APP-207ENST00000415997 SOX4Q06945 474 aaPredicted RBP4.5□□□□□ -1.69
APP-207ENST00000415997 CST9Q5W186 159 aa4.5□□□□□ -1.69
APP-207ENST00000415997 XKR5Q6UX68 686 aa4.5□□□□□ -1.69
APP-207ENST00000415997 DYMQ7RTS9 669 aa4.5□□□□□ -1.69
APP-207ENST00000415997 VSIG10LQ86VR7 867 aa4.5□□□□□ -1.69
APP-207ENST00000415997 CNTROBQ8N137 903 aa4.5□□□□□ -1.69
APP-207ENST00000415997 KCNH5Q8NCM2 988 aa4.5□□□□□ -1.69
APP-207ENST00000415997 C2CD4AQ8NCU7 369 aaPredicted RBP4.5□□□□□ -1.69
APP-207ENST00000415997 LINC00116Q8NCU8 138 aa4.5□□□□□ -1.69
APP-207ENST00000415997 DDX54Q8TDD1 881 aaKnown RBP4.5□□□□□ -1.69
APP-207ENST00000415997 CLP1Q92989 425 aaKnown RBP4.5□□□□□ -1.69
APP-207ENST00000415997 YIPF2Q9BWQ6 316 aa4.5□□□□□ -1.69
APP-207ENST00000415997 CDK19Q9BWU1 502 aa4.5□□□□□ -1.69
APP-207ENST00000415997 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
APP-207ENST00000415997 LATS2Q9NRM7 1088 aa4.5□□□□□ -1.69
APP-207ENST00000415997 BSDC1Q9NW68 430 aaPredicted RBP4.5□□□□□ -1.69
APP-207ENST00000415997 ABT1Q9ULW3 272 aaKnown RBP4.5□□□□□ -1.69
APP-207ENST00000415997 POLIQ9UNA4 740 aa4.5□□□□□ -1.69
APP-207ENST00000415997 KAT6BQ8WYB5 2073 aa4.5□□□□□ -1.69
APP-207ENST00000415997 DICER1Q9UPY3 1922 aaKnown RBP4.49□□□□□ -1.69
APP-207ENST00000415997 METTL12A8MUP2 240 aa4.49□□□□□ -1.69
APP-207ENST00000415997 ESRRAP11474 423 aaPredicted RBP4.49□□□□□ -1.69
APP-207ENST00000415997 MPSTP25325 297 aa4.49□□□□□ -1.69
APP-207ENST00000415997 MZF1P28698 734 aaPredicted RBP4.49□□□□□ -1.69
APP-207ENST00000415997 EIF1AXP47813 144 aaKnown RBP4.49□□□□□ -1.69
APP-207ENST00000415997 TMF1P82094 1093 aa4.49□□□□□ -1.69
APP-207ENST00000415997 MTMR3Q13615 1198 aa4.49□□□□□ -1.69
APP-207ENST00000415997 FAM50AQ14320 339 aaKnown RBP4.49□□□□□ -1.69
APP-207ENST00000415997 RGL3Q3MIN7 710 aa4.49□□□□□ -1.69
APP-207ENST00000415997 AKAP4Q5JQC9 854 aa4.49□□□□□ -1.69
APP-207ENST00000415997 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
APP-207ENST00000415997 ZAR1Q86SH2 424 aa4.49□□□□□ -1.69
APP-207ENST00000415997 HHIPL1Q96JK4 782 aa4.49□□□□□ -1.69
APP-207ENST00000415997 SUGCTQ9HAC7 445 aa4.49□□□□□ -1.69
APP-207ENST00000415997 RAD18Q9NS91 495 aa4.49□□□□□ -1.69
APP-207ENST00000415997 NLRP2Q9NX02 1062 aa4.49□□□□□ -1.69
APP-207ENST00000415997 SAGE1Q9NXZ1 904 aa4.49□□□□□ -1.69
APP-207ENST00000415997 PRKAG2Q9UGJ0 569 aa4.49□□□□□ -1.69
APP-207ENST00000415997 FOXD3Q9UJU5 478 aaPredicted RBP4.49□□□□□ -1.69
APP-207ENST00000415997 TRAK1Q9UPV9 953 aa4.49□□□□□ -1.69
APP-207ENST00000415997 DLEC1Q9Y238 1755 aa4.49□□□□□ -1.69
APP-207ENST00000415997 LTBP3Q9NS15 1303 aa4.48□□□□□ -1.69
APP-207ENST00000415997 LAMA2P24043 3122 aaKnown RBP4.48□□□□□ -1.69
APP-207ENST00000415997 FAM208AQ9UK61 1670 aaKnown RBP4.48□□□□□ -1.69
APP-207ENST00000415997 POLR3DP05423 398 aaPredicted RBP4.48□□□□□ -1.69
APP-207ENST00000415997 EDN3P14138 238 aa4.48□□□□□ -1.69
APP-207ENST00000415997 PLA2G5P39877 138 aa4.48□□□□□ -1.69
APP-207ENST00000415997 SRPK2P78362 688 aaKnown RBP4.48□□□□□ -1.69
APP-207ENST00000415997 JAG1P78504 1218 aa4.48□□□□□ -1.69
APP-207ENST00000415997 DDR1Q08345 913 aa4.48□□□□□ -1.69
APP-207ENST00000415997 COL19A1Q14993 1142 aa4.48□□□□□ -1.69
APP-207ENST00000415997 MAP1SQ66K74 1059 aaPredicted RBP4.48□□□□□ -1.69
APP-207ENST00000415997 NFXL1Q6ZNB6 911 aa4.48□□□□□ -1.69
APP-207ENST00000415997 ZNF765Q7L2R6 523 aa4.48□□□□□ -1.69
APP-207ENST00000415997 CTU1Q7Z7A3 348 aaKnown RBP4.48□□□□□ -1.69
APP-207ENST00000415997 SAPCD2Q86UD0 394 aa4.48□□□□□ -1.69
APP-207ENST00000415997 HELQQ8TDG4 1101 aa4.48□□□□□ -1.69
APP-207ENST00000415997 GTF3C2Q8WUA4 911 aaPredicted RBP4.48□□□□□ -1.69
APP-207ENST00000415997 ZC3H7BQ9UGR2 993 aaKnown RBP4.48□□□□□ -1.69
APP-207ENST00000415997 TNFRSF21O75509 655 aa4.47□□□□□ -1.69
APP-207ENST00000415997 PRNPP04156 253 aa4.47□□□□□ -1.69
APP-207ENST00000415997 MAOBP27338 520 aa4.47□□□□□ -1.69
APP-207ENST00000415997 FMR1Q06787 632 aaKnown RBP eCLIP4.47□□□□□ -1.69
APP-207ENST00000415997 ITPK1Q13572 414 aa4.47□□□□□ -1.69
APP-207ENST00000415997 PLCL1Q15111 1095 aa4.47□□□□□ -1.69
APP-207ENST00000415997 ZNF648Q5T619 568 aaPredicted RBP4.47□□□□□ -1.69
APP-207ENST00000415997 CIAPIN1Q6FI81 312 aa4.47□□□□□ -1.69
APP-207ENST00000415997 CBLL1Q75N03 491 aa4.47□□□□□ -1.69
APP-207ENST00000415997 AGBL5Q8NDL9 886 aa4.47□□□□□ -1.69
APP-207ENST00000415997 PRO3102Q9H379 93 aa4.47□□□□□ -1.69
APP-207ENST00000415997 PAK6Q9NQU5 681 aaPredicted RBP4.47□□□□□ -1.69
APP-207ENST00000415997 AP4E1Q9UPM8 1137 aa4.47□□□□□ -1.69
APP-207ENST00000415997 ACTL7BQ9Y614 415 aa4.47□□□□□ -1.69
APP-207ENST00000415997 CCDC88AQ3V6T2 1871 aa4.47□□□□□ -1.69
APP-207ENST00000415997 FER1L6Q2WGJ9 1857 aa4.46□□□□□ -1.7
APP-207ENST00000415997 ADH5P11766 374 aa4.46□□□□□ -1.7
APP-207ENST00000415997 JUNBP17275 347 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms