RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 XPNPEP3Q9NQH7 507 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 PHF24Q9UPV7 400 aa15.96■□□□□ 0.15
CTHRC1-202ENST00000415886 PARP14Q460N5 1801 aa15.96■□□□□ 0.14
CTHRC1-202ENST00000415886 ZNF532Q9HCE3 1301 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 CLTBP09497 229 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 FCER1AP12319 257 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 AKR1B1P15121 316 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 ICA1Q05084 483 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 TMEM132BQ14DG7 1078 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 SIAH1Q8IUQ4 282 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 SIRT2Q8IXJ6 389 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 EYSQ5T1H1 3165 aa15.95■□□□□ 0.14
CTHRC1-202ENST00000415886 PGK1P00558 417 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 PGK2P07205 417 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 RARBP10826 455 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 LENG1Q96BZ8 264 aaPredicted RBP15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 MMP19Q99542 508 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 VCPKMTQ9H867 229 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 SWAP70Q9UH65 585 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 TMX2Q9Y320 296 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 TACC3Q9Y6A5 838 aa15.94■□□□□ 0.14
CTHRC1-202ENST00000415886 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 TCRBV5S4A2TA0A5A2 114 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 SMIM22K7EJ46 135 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 GOLIM4O00461 696 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 WDR46O15213 610 aaKnown RBP15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 PQBP1O60828 265 aaKnown RBP15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 TAL1P17542 331 aaPredicted RBP15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 DNAJC2Q99543 621 aaKnown RBP15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 FBXO28Q9NVF7 368 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 MYH8P13535 1937 aa15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 COL11A1P12107 1806 aaPredicted RBP15.93■□□□□ 0.14
CTHRC1-202ENST00000415886 LAMA2P24043 3122 aaKnown RBP15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 ROBO3Q96MS0 1386 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 KIAA0355O15063 1070 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 PRKAB2O43741 272 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 SLC25A27O95847 323 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 RAG1P15918 1043 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 SLFNL1Q499Z3 407 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 RNF180Q86T96 592 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 TINF2Q9BSI4 451 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 LRRCC1Q9C099 1032 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 SH2D4AQ9H788 454 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 ZNFX1Q9P2E3 1918 aaKnown RBP15.92■□□□□ 0.14
CTHRC1-202ENST00000415886 PLXNA1Q9UIW2 1896 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 TMEM265A0A087WTH1 108 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 CYP2D7A0A087X1C5 515 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 FPGSQ05932 587 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 ZNF792Q3KQV3 632 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 RIOX2Q8IUF8 465 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 PRDM6Q9NQX0 595 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 ADAMTS5Q9UNA0 930 aa15.91■□□□□ 0.14
CTHRC1-202ENST00000415886 ZNF865P0CJ78 1059 aaPredicted RBP15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 AKR1A1P14550 325 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 RRP1P56182 461 aaKnown RBP15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 KCTD2Q14681 263 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 TMEM39AQ9NV64 488 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 SMCHD1A6NHR9 2005 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 VCANP13611 3396 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 CDH23Q9H251 3354 aa15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
CTHRC1-202ENST00000415886 VWA5AO00534 786 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 MBD4O95243 580 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 EEF2P13639 858 aaKnown RBP15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 DNAJB2P25686 324 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 CDK8P49336 464 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 FAAP100Q0VG06 881 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 CCDC17Q96LX7 622 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 ZNF214Q9UL59 606 aaPredicted RBP15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 DIS3Q9Y2L1 958 aaKnown RBP15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 SYNRGQ9UMZ2 1314 aa15.89■□□□□ 0.13
CTHRC1-202ENST00000415886 RAD21O60216 631 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 STAT3P40763 770 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 FAM83BQ5T0W9 1011 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 REPS2Q8NFH8 660 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 SYMPKQ92797 1274 aaKnown RBP15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 STARD7Q9NQZ5 370 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 ATP8A2Q9NTI2 1148 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 PPP1R9AQ9ULJ8 1098 aa15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 SPTBN5Q9NRC6 3674 aaKnown RBP15.88■□□□□ 0.13
CTHRC1-202ENST00000415886 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 DCDC2CA8MYV0 355 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 USP17L12C9JPN9 530 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 USP17L21D6R901 530 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 CHGBP05060 677 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 ADD2P35612 726 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 ACLYP53396 1101 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 C16orf86Q6ZW13 317 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms