RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 KDM2BQ8NHM5 1336 aa7.63□□□□□ -1.19
CSTF1-202ENST00000415828 COBLO75128 1261 aa7.63□□□□□ -1.19
CSTF1-202ENST00000415828 PRPF40AO75400 957 aaKnown RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 MAP4P27816 1152 aaKnown RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 TRIM26Q12899 539 aaPredicted RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 DDX54Q8TDD1 881 aaKnown RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 DUSP9Q99956 384 aaKnown RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 HIRIP3Q9BW71 556 aaPredicted RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 NRSN2Q9GZP1 204 aa7.63□□□□□ -1.19
CSTF1-202ENST00000415828 SUGCTQ9HAC7 445 aa7.63□□□□□ -1.19
CSTF1-202ENST00000415828 STK26Q9P289 416 aa7.63□□□□□ -1.19
CSTF1-202ENST00000415828 GPN3Q9UHW5 284 aaPredicted RBP7.63□□□□□ -1.19
CSTF1-202ENST00000415828 CRB1P82279 1406 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 PLEKHG2Q9H7P9 1386 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 TIAF1O95411 115 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 PTPN12Q05209 780 aaKnown RBP7.62□□□□□ -1.19
CSTF1-202ENST00000415828 COL19A1Q14993 1142 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 SMIM5Q71RC9 77 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 SHKBP1Q8TBC3 707 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 OSBPL7Q9BZF2 842 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 RANBP2P49792 3224 aaKnown RBP7.62□□□□□ -1.19
CSTF1-202ENST00000415828 MEGF6O75095 1541 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 UBR3Q6ZT12 1888 aa7.62□□□□□ -1.19
CSTF1-202ENST00000415828 DAPK1P53355 1430 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 CEP290O15078 2479 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 PRR19A6NJB7 356 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 B3GALT4O96024 378 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 FGD1P98174 961 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 MFSD14AQ96MC6 490 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 RNF19AQ9NV58 838 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 USP6P35125 1406 aa7.61□□□□□ -1.19
CSTF1-202ENST00000415828 CACNA1AO00555 2505 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 BRD4O60885 1362 aaPredicted RBP7.6□□□□□ -1.19
CSTF1-202ENST00000415828 WDR64B1ANS9 1081 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 CTSBP07858 339 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 XRCC5P13010 732 aaKnown RBP7.6□□□□□ -1.19
CSTF1-202ENST00000415828 ERCC3P19447 782 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 MAOBP27338 520 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 GNA15P30679 374 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 GSTT1P30711 240 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 USP11P51784 963 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 FAAP100Q0VG06 881 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 C12orf49Q9H741 205 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 ZFYVE1Q9HBF4 777 aa7.6□□□□□ -1.19
CSTF1-202ENST00000415828 CENPFP49454 3210 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 LAMB4A4D0S4 1761 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 DICER1Q9UPY3 1922 aaKnown RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 KIAA1324LA8MWY0 1029 aaPredicted RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 GIPC1O14908 333 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 CYP11A1P05108 521 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 USP17L7P0C7H9 530 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 EIF4BP23588 611 aaKnown RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 GRIK1P39086 918 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 MFAP1P55081 439 aaKnown RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 SOX4Q06945 474 aaPredicted RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 POU4F3Q15319 338 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 RPS26P11Q5JNZ5 115 aaPredicted RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 CDPF1Q6NVV7 123 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 FBXL6Q8N531 539 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 C2CD4AQ8NCU7 369 aaPredicted RBP7.59□□□□□ -1.19
CSTF1-202ENST00000415828 FBLIM1Q8WUP2 373 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 GCC1Q96CN9 775 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 FRMD6Q96NE9 622 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 CORO1BQ9BR76 489 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 SRCIN1Q9C0H9 1055 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 PARP2Q9UGN5 583 aa7.59□□□□□ -1.19
CSTF1-202ENST00000415828 DOT1LQ8TEK3 1739 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 BTBD11A6QL63 1104 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 FBXO24O75426 580 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 ECEL1O95672 775 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 TAGLNQ01995 201 aaKnown RBP7.58□□□□□ -1.2
CSTF1-202ENST00000415828 PPP2R3AQ06190 1150 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 PSMD2Q13200 908 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 INTS5Q6P9B9 1019 aaKnown RBP7.58□□□□□ -1.2
CSTF1-202ENST00000415828 TPTE2Q6XPS3 522 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
CSTF1-202ENST00000415828 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
CSTF1-202ENST00000415828 PRR36Q9H6K5 1346 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 FAM95CA0A1B0GW59 222 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 ADH5P11766 374 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 PDE3AQ14432 1141 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 FBXO33Q7Z6M2 555 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 FAM161BQ96MY7 647 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 BCL2L13Q9BXK5 485 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 ZC3H12CQ9C0D7 883 aaKnown RBP7.57□□□□□ -1.2
CSTF1-202ENST00000415828 TMEM39AQ9NV64 488 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 RNF181Q9P0P0 153 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 ANKRD30AQ9BXX3 1397 aa7.57□□□□□ -1.2
CSTF1-202ENST00000415828 SPATA31E1Q6ZUB1 1445 aa7.56□□□□□ -1.2
CSTF1-202ENST00000415828 ADAMTS4O75173 837 aa7.56□□□□□ -1.2
CSTF1-202ENST00000415828 F13BP05160 661 aa7.56□□□□□ -1.2
CSTF1-202ENST00000415828 HOXA10P31260 410 aaPredicted RBP7.56□□□□□ -1.2
CSTF1-202ENST00000415828 AP3B2Q13367 1082 aa7.56□□□□□ -1.2
CSTF1-202ENST00000415828 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms