RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 KIF18AQ8NI77 898 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 AKR1B1P15121 316 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 ICA1Q05084 483 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 FAM170AA1A519 330 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 NEMFO60524 1076 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 PCP11498 1178 aaKnown RBP13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 PDE4DQ08499 809 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 KCNQ5Q9NR82 932 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 SCN11AQ9UI33 1791 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 WDR19Q8NEZ3 1342 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 CRKP46108 304 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 TCERG1LQ5VWI1 586 aa13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 ZNF277Q9NRM2 450 aaPredicted RBP13.19□□□□□ -0.3
FNDC3B-202ENST00000415807 UBXN2AP68543 259 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 SP4Q02446 784 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 DGKHQ86XP1 1220 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■□□□□ 11.1
FNDC3B-202ENST00000415807 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 PSMA7O14818 248 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 GNG11P61952 73 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 AMPD3Q01432 767 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 NBPF11Q86T75 865 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 TBCKQ8TEA7 893 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 LZTFL1Q9NQ48 299 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 C5P01031 1676 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 TROAPQ12815 778 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 EZH2Q15910 746 aaKnown RBP13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 CALCRLQ16602 461 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 FAM217BQ9NTX9 383 aaPredicted RBP13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 ZBTB12Q9Y330 459 aaPredicted RBP13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 ECE2O60344 883 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 NTRK3Q16288 839 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 CABP7Q86V35 215 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 FLT1P17948 1338 aa13.18□□□□□ -0.3
FNDC3B-202ENST00000415807 POLD1P28340 1107 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 UBXN1Q04323 297 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 SP8Q8IXZ3 490 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 PSTPIP2Q9H939 334 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 TMEM260Q9NX78 707 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 TTLL12Q14166 644 aaPredicted RBP13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 CCDC40Q4G0X9 1142 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 WWC2Q6AWC2 1192 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 TTBK2Q6IQ55 1244 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 SYT10Q6XYQ8 523 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 KRT25Q7Z3Z0 450 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 NIM1KQ8IY84 436 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 PTPREP23469 700 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 PLS1Q14651 629 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 MLKLQ8NB16 471 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
FNDC3B-202ENST00000415807 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 TTLL1O95922 423 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 NFIAQ12857 509 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 ABCB5Q2M3G0 1257 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 MAN1B1Q9UKM7 699 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 SEPT2Q15019 361 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 CERS3Q8IU89 383 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 AP5Z1O43299 807 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 RASA1P20936 1047 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 KIAA1328Q86T90 577 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 POLD4Q9HCU8 107 aa13.16□□□□□ -0.3
FNDC3B-202ENST00000415807 ORC4O43929 436 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 ARID5AQ03989 594 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 RESP18Q5W5W9 173 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 IGSF22Q8N9C0 903 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 GH2P01242 217 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.38e-8■■□□□ 14.5
FNDC3B-202ENST00000415807 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
FNDC3B-202ENST00000415807 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms