RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 SLC1A4P43007 532 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 ANTXR2P58335 489 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 SP3Q02447 781 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 C8orf34Q49A92 452 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 GTF3C2Q8WUA4 911 aaPredicted RBP16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 NEK1Q96PY6 1258 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 PAGR1Q9BTK6 254 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
SAPCD1-208ENST00000415669 BCRP11274 1271 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 COG2Q14746 738 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 WTAPQ15007 396 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 SEC23AQ15436 765 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 ADCK5Q3MIX3 580 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 PNMA1Q8ND90 353 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 CD99L2Q8TCZ2 262 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 DCAF4Q8WV16 495 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 GMCL1Q96IK5 515 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 JAKMIP1Q96N16 626 aaKnown RBP16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 PRDM10Q9NQV6 1147 aa16.78■□□□□ 0.28
SAPCD1-208ENST00000415669 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 MYPNQ86TC9 1320 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 PDHBP11177 359 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 KCTD1Q719H9 257 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 ANKS1AQ92625 1134 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 KCNB2Q92953 911 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 ATG4CQ96DT6 458 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 ERO1AQ96HE7 468 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 SLF1Q9BQI6 1058 aa16.77■□□□□ 0.28
SAPCD1-208ENST00000415669 PEX10O60683 326 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 DSG3P32926 999 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 STAT2P52630 851 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 LACTBP83111 547 aaPredicted RBP16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 KIF22Q14807 665 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 TMEM87BQ96K49 555 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 LRRC2Q9BYS8 371 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 TXNRD2Q9NNW7 524 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 HOXC10Q9NYD6 342 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 FEM1BQ9UK73 627 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 PPP1R9AQ9ULJ8 1098 aa16.76■□□□□ 0.27
SAPCD1-208ENST00000415669 DOCK3Q8IZD9 2030 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 TMEM232C9JQI7 657 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 SEC24BO95487 1268 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 HMGB1P09429 215 aaKnown RBP16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 ERVK-9P63128 1117 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 ERVK-24P63145 666 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 LBX2Q6XYB7 198 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 KIFC2Q96AC6 838 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 LY9Q9HBG7 655 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 SENP2Q9HC62 589 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 MORF4L1Q9UBU8 362 aa16.75■□□□□ 0.27
SAPCD1-208ENST00000415669 WDR19Q8NEZ3 1342 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 CPA1P15085 419 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 PSMA5P28066 241 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 BLOC1S2Q6QNY1 142 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 POTEEQ6S8J3 1075 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 MB21D1Q8N884 522 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 GPRC5AQ8NFJ5 357 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 IGDCC4Q8TDY8 1250 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 ARHGAP39Q9C0H5 1083 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 GPCPD1Q9NPB8 672 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 GPHNQ9NQX3 736 aaPredicted RBP16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 RBPJLQ9UBG7 517 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 RABGAP1Q9Y3P9 1069 aa16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
SAPCD1-208ENST00000415669 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 CNMDO75829 334 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 SNHG28P0DPA3 235 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 FCGRTP55899 365 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 PLS1Q14651 629 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 CATIPQ7Z7H3 387 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 CCAR1Q8IX12 1150 aaKnown RBP16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 PRPF38AQ8NAV1 312 aaKnown RBP16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 CTDP1Q9Y5B0 961 aaPredicted RBP16.73■□□□□ 0.27
SAPCD1-208ENST00000415669 VWA5AO00534 786 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 CTGFP29279 349 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 SLC16A2P36021 539 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 PSMC4P43686 418 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 CCNA1P78396 465 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms