RNA–Protein interactions for RNA: ENST00000415430.7

VSIG1-202, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VSIG1, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-202ENST00000415430 KIRREL3Q8IZU9 778 aa9.57□□□□□ -0.88
VSIG1-202ENST00000415430 FAM76AQ8TAV0 307 aa9.57□□□□□ -0.88
VSIG1-202ENST00000415430 LMBR1Q8WVP7 490 aa9.57□□□□□ -0.88
VSIG1-202ENST00000415430 MPP4Q96JB8 637 aa9.57□□□□□ -0.88
VSIG1-202ENST00000415430 VPS33BQ9H267 617 aa9.57□□□□□ -0.88
VSIG1-202ENST00000415430 BATF3Q9NR55 127 aa9.57□□□□□ -0.88
VSIG1-202ENST00000415430 ZNHIT6Q9NWK9 470 aaKnown RBP9.57□□□□□ -0.88
VSIG1-202ENST00000415430 LRRC10BA6NIK2 292 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 CASTP20810 708 aaKnown RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 TMEM62Q0P6H9 643 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 RCN1Q15293 331 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 CWF19L1Q69YN2 538 aaKnown RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 SYCP3Q8IZU3 236 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 HDAC7Q8WUI4 952 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 RBM41Q96IZ5 413 aaKnown RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 TRIM64CA6NLI5 447 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 BOLA2-SMG1P6H3BVE0 249 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 DESP17661 470 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 IL4RP24394 825 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 CAPRIN2Q6IMN6 1127 aaKnown RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 NANOGNBQ7Z5D8 188 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 CEP57Q86XR8 500 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 DNAJC10Q8IXB1 793 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 PEX5LQ8IYB4 626 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 C16orf71Q8IYS4 520 aaPredicted RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 CCDC82Q8N4S0 544 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 OR8K1Q8NGG5 319 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 KCNF1Q9H3M0 494 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 PHAXQ9H814 394 aaKnown RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 WDR37Q9Y2I8 494 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 ARHGAP29Q52LW3 1261 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 TTC5Q8N0Z6 440 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 KCNN1Q92952 543 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 ALS2CR12Q96Q35 445 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 UIMC1Q96RL1 719 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
VSIG1-202ENST00000415430 SENP2Q9HC62 589 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 SWAP70Q9UH65 585 aa9.56□□□□□ -0.88
VSIG1-202ENST00000415430 ZNF804BA4D1E1 1349 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 FESP07332 822 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 FOSL1P15407 271 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 INPP5BP32019 993 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 SH3BGRP55822 239 aaPredicted RBP9.55□□□□□ -0.88
VSIG1-202ENST00000415430 ERCC6LQ2NKX8 1250 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 PACS1Q6VY07 963 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 BICD2Q8TD16 824 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 PMM1Q92871 262 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 NACC2Q96BF6 587 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 CAPS2Q9BXY5 557 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 MFRPQ9BY79 579 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 KCNQ2O43526 872 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 FGFR2P21802 821 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 PAPOLAP51003 745 aaKnown RBP9.55□□□□□ -0.88
VSIG1-202ENST00000415430 GUCY1B3Q02153 619 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 DMPKQ09013 629 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 SLC4A8Q2Y0W8 1093 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 WLSQ5T9L3 541 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 TMC4Q7Z404 712 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.55□□□□□ -0.88
VSIG1-202ENST00000415430 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 CUL5Q93034 780 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 FBXW7Q969H0 707 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 JAKMIP2Q96AA8 810 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 SH3GL1Q99961 368 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 RTFDC1Q9BY42 306 aaPredicted RBP9.55□□□□□ -0.88
VSIG1-202ENST00000415430 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
VSIG1-202ENST00000415430 KLHL42Q9P2K6 505 aa9.55□□□□□ -0.88
VSIG1-202ENST00000415430 F6X3S4 739 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 ROR2Q01974 943 aaKnown RBP9.54□□□□□ -0.88
VSIG1-202ENST00000415430 YIPF3Q9GZM5 350 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 LTBP3Q9NS15 1303 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 GRM8O00222 908 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 CUL4BQ13620 913 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 CHD1LQ86WJ1 897 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 UBXN6Q9BZV1 441 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 VPS18Q9P253 973 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 DNAI1Q9UI46 699 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 ZBTB1Q9Y2K1 713 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 MYH2Q9UKX2 1941 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
VSIG1-202ENST00000415430 CFAP69A5D8W1 941 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 ATICP31939 592 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 CUL3Q13618 768 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 CEP85LQ5SZL2 805 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 PTF1AQ7RTS3 328 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 AMIGO3Q86WK7 504 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 PDILTQ8N807 584 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 DTNBP1Q96EV8 351 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
VSIG1-202ENST00000415430 SALL1Q9NSC2 1324 aa9.53□□□□□ -0.88
VSIG1-202ENST00000415430 UNCXA6NJT0 531 aa9.53□□□□□ -0.88
VSIG1-202ENST00000415430 POLRMTO00411 1230 aaKnown RBP9.53□□□□□ -0.88
VSIG1-202ENST00000415430 ZEB2O60315 1214 aa9.53□□□□□ -0.88
VSIG1-202ENST00000415430 MBD4O95243 580 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms