RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 PARP1P09874 1014 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 HIRAP54198 1017 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 ATP2B2Q01814 1243 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 ICA1Q05084 483 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 FUT2Q10981 343 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 RRP1BQ14684 758 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 NOLC1Q14978 699 aaKnown RBP eCLIP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 SEPT2Q15019 361 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 MCTP1Q6DN14 999 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 NBPF11Q86T75 865 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 FERMT3Q86UX7 667 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 LRRC47Q8N1G4 583 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 SRBD1Q8N5C6 995 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 RGS22Q8NE09 1264 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 FBXO18Q8NFZ0 1043 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 GPT2Q8TD30 523 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 MKL1Q969V6 931 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 LZTS2Q9BRK4 669 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 GGA3Q9NZ52 723 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 RBM27Q9P2N5 1060 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 MAD2L2Q9UI95 211 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 SCAF8Q9UPN6 1271 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 MTMR7Q9Y216 660 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 KLRF2D3W0D1 207 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 UBE2Q2LH0YL09 131 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 CTIFO43310 598 aaKnown RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 SNHG28P0DPA3 235 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 PDHBP11177 359 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 GUCY1A2P33402 732 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 JAG1P78504 1218 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 GUCY1B3Q02153 619 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 RESTQ13127 1097 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 TRIM29Q14134 588 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 SHROOM1Q2M3G4 852 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 FOXD4L6Q3SYB3 417 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 ASPRV1Q53RT3 343 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 KRT40Q6A162 431 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 OTUD7BQ6GQQ9 843 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 CAVIN1Q6NZI2 390 aaKnown RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 USP17L2Q6R6M4 530 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 FOXD4L3Q6VB84 417 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 SIAH1Q8IUQ4 282 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 CREBRFQ8IUR6 639 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 STAG2Q8N3U4 1231 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 ANKRD7Q92527 254 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 HOOK2Q96ED9 719 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 L3MBTL3Q96JM7 780 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 AIFM3Q96NN9 605 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 GJB4Q9NTQ9 266 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 ZBTB21Q9ULJ3 1066 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 PPP2R3BQ9Y5P8 575 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-203ENST00000414670 CNTNAP5Q8WYK1 1306 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 PITPNM2Q9BZ72 1349 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 LAMB1P07942 1786 aa7.18□□□□□ -1.26
ITGB1-203ENST00000414670 PSME4Q14997 1843 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 BAZ2AQ9UIF9 1905 aaKnown RBP7.17□□□□□ -1.26
ITGB1-203ENST00000414670 GLTPD2A6NH11 291 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 ASNSP08243 561 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 GOLGA8HP0CJ92 632 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 XBP1P17861 261 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 SMARCA1P28370 1054 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 CAP2P40123 477 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 GABPB1Q06547 395 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-203ENST00000414670 ZNF543Q08ER8 600 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 PKN1Q16512 942 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 SUPT20HL1Q3ZLR7 823 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 GPATCH4Q5T3I0 446 aaKnown RBP7.17□□□□□ -1.26
ITGB1-203ENST00000414670 NBPF12Q5TAG4 269 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-203ENST00000414670 DCAF15Q66K64 600 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 USP50Q70EL3 339 aaPredicted RBP7.17□□□□□ -1.26
ITGB1-203ENST00000414670 RASGRP2Q7LDG7 609 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 DCPSQ96C86 337 aaKnown RBP7.17□□□□□ -1.26
ITGB1-203ENST00000414670 CHAMP1Q96JM3 812 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 SPZ1Q9BXG8 430 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 TSPY26PQ9H489 355 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 GINM1Q9NU53 330 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 OGFRQ9NZT2 677 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 SYNPO2Q9UMS6 1093 aa7.17□□□□□ -1.26
ITGB1-203ENST00000414670 hCG_1642624A0A1W2PR95 340 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 A0A1W2PRG0 241 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 IQCA1LA6NCM1 817 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 PHF20L1A8MW92 1017 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 F5H6K3 240 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 CYTH3O43739 400 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 RAD21O60216 631 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 CTNND1O60716 968 aaKnown RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SCG2P13521 617 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 EPHX2P34913 555 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SLC1A4P43007 532 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 KRT85P78386 507 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 KIF23Q02241 960 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 DNM1Q05193 864 aaKnown RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 KLRC3Q07444 240 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SLC20A2Q08357 652 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SAFBQ15424 915 aaKnown RBP eCLIP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms