RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 LHX8Q68G74 356 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 GIMAP6Q6P9H5 292 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 SHCBP1Q8NEM2 672 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 NUP88Q99567 741 aaPredicted RBP18.58■□□□□ 0.56
ACTB-202ENST00000414620 PCDH10Q9P2E7 1040 aa18.58■□□□□ 0.56
ACTB-202ENST00000414620 GNAT2P19087 354 aa18.57■□□□□ 0.56
ACTB-202ENST00000414620 TMEM132BQ14DG7 1078 aa18.57■□□□□ 0.56
ACTB-202ENST00000414620 LRRFIP1Q32MZ4 808 aaKnown RBP18.57■□□□□ 0.56
ACTB-202ENST00000414620 ANKRD45Q5TZF3 282 aa18.57■□□□□ 0.56
ACTB-202ENST00000414620 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
ACTB-202ENST00000414620 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
ACTB-202ENST00000414620 SALL3Q9BXA9 1300 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 SMCHD1A6NHR9 2005 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
ACTB-202ENST00000414620 COBLO75128 1261 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 SYN1P17600 705 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 TRPV1Q8NER1 839 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
ACTB-202ENST00000414620 DDX20Q9UHI6 824 aaKnown RBP18.56■□□□□ 0.56
ACTB-202ENST00000414620 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
ACTB-202ENST00000414620 ANO1Q5XXA6 986 aa18.55■□□□□ 0.56
ACTB-202ENST00000414620 ZNF444Q8N0Y2 327 aaPredicted RBP18.55■□□□□ 0.56
ACTB-202ENST00000414620 PRO3102Q9H379 93 aa18.55■□□□□ 0.56
ACTB-202ENST00000414620 MROH8Q9H579 483 aa18.55■□□□□ 0.56
ACTB-202ENST00000414620 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
ACTB-202ENST00000414620 MCM3APO60318 1980 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 STRNO43815 780 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 NDUFB10O96000 172 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 CYBAP13498 195 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
ACTB-202ENST00000414620 MMP19Q99542 508 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 NACAP1Q9BZK3 213 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 NAPBQ9H115 298 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 NYAP2Q9P242 653 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 ADAMTS5Q9UNA0 930 aa18.54■□□□□ 0.56
ACTB-202ENST00000414620 IGKV6D-41A0A0C4DH26 115 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 F5H6K3 240 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 VWA5AO00534 786 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 COL6A1P12109 1028 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 KLRC3Q07444 240 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 OLFML2BQ68BL8 750 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 CEP95Q96GE4 821 aa18.53■□□□□ 0.56
ACTB-202ENST00000414620 SLC25A27O95847 323 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 IGHA2P01877 340 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 PGK2P07205 417 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 FCER1AP12319 257 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 STAT3P40763 770 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 SLC4A3P48751 1232 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 PPARAQ07869 468 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 LRRC26Q2I0M4 334 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 FAM47AQ5JRC9 791 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 PRAMEF19Q5SWL8 479 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 RIOX2Q8IUF8 465 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 REPS2Q8NFH8 660 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 MAML3Q96JK9 1138 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 SLF1Q9BQI6 1058 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 SLC5A4Q9NY91 659 aa18.52■□□□□ 0.56
ACTB-202ENST00000414620 ZNF214Q9UL59 606 aaPredicted RBP18.52■□□□□ 0.56
ACTB-202ENST00000414620 MSCO60682 206 aa18.51■□□□□ 0.55
ACTB-202ENST00000414620 TSPY3P0CV98 308 aa18.51■□□□□ 0.55
ACTB-202ENST00000414620 TSPY8P0CW00 308 aa18.51■□□□□ 0.55
ACTB-202ENST00000414620 CHMP4CQ96CF2 233 aa18.51■□□□□ 0.55
ACTB-202ENST00000414620 SENP6Q9GZR1 1112 aaPredicted RBP18.51■□□□□ 0.55
ACTB-202ENST00000414620 ISY1Q9ULR0 285 aaKnown RBP18.51■□□□□ 0.55
ACTB-202ENST00000414620 FOXP2O15409 715 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 MYCNP04198 464 aaPredicted RBP18.5■□□□□ 0.55
ACTB-202ENST00000414620 ATN1P54259 1190 aaPredicted RBP18.5■□□□□ 0.55
ACTB-202ENST00000414620 PDE1AP54750 535 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 CTDSPL2Q05D32 466 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 PDE4BQ07343 736 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
ACTB-202ENST00000414620 GJC2Q5T442 439 aaPredicted RBP18.5■□□□□ 0.55
ACTB-202ENST00000414620 ABRAQ8N0Z2 381 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 MTMR4Q9NYA4 1195 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 PLIN4Q96Q06 1357 aa18.5■□□□□ 0.55
ACTB-202ENST00000414620 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 SLC3A2P08195 630 aaKnown RBP18.49■□□□□ 0.55
ACTB-202ENST00000414620 TFAP4Q01664 338 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 KCTD2Q14681 263 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 VPS53Q5VIR6 699 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
ACTB-202ENST00000414620 CPXCR1Q8N123 301 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 KIFC2Q96AC6 838 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 EVI5LQ96CN4 794 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 INCENPQ9NQS7 918 aa18.49■□□□□ 0.55
ACTB-202ENST00000414620 TTLL1O95922 423 aa18.48■□□□□ 0.55
ACTB-202ENST00000414620 MAGEA10P43363 369 aaPredicted RBP18.48■□□□□ 0.55
ACTB-202ENST00000414620 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
ACTB-202ENST00000414620 NEDD1Q8NHV4 660 aa18.48■□□□□ 0.55
ACTB-202ENST00000414620 GDF15Q99988 308 aa18.48■□□□□ 0.55
ACTB-202ENST00000414620 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
ACTB-202ENST00000414620 CTDP1Q9Y5B0 961 aaPredicted RBP18.48■□□□□ 0.55
ACTB-202ENST00000414620 DNM1LO00429 736 aa18.47■□□□□ 0.55
ACTB-202ENST00000414620 SOX1O00570 391 aaPredicted RBP18.47■□□□□ 0.55
ACTB-202ENST00000414620 SEPT4O43236 478 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms