RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 NEDD1Q8NHV4 660 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 MTMR4Q9NYA4 1195 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 FLRT1Q9NZU1 646 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 IVNS1ABPQ9Y6Y0 642 aa12.09□□□□□ -0.47
NCKIPSD-202ENST00000413374 SLC15A5A6NIM6 579 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 TTLL1O95922 423 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 CACNB2Q08289 660 aaPredicted RBP12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 ALX1Q15699 326 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 SLFN13Q68D06 897 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 DPP9Q86TI2 863 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 DPF3Q92784 378 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 DIAPH3Q9NSV4 1193 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
NCKIPSD-202ENST00000413374 BAZ2AQ9UIF9 1905 aaKnown RBP12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 VWA5AO00534 786 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 ADORA2AP29274 412 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 CPXCR1Q8N123 301 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 MKL1Q969V6 931 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 APBA2Q99767 749 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 IL17RBQ9NRM6 502 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 PPP1R9AQ9ULJ8 1098 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
NCKIPSD-202ENST00000413374 COBLO75128 1261 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 MCCP23508 829 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 CNGA1P29973 690 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 CYP2C19P33261 490 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 STAT3P40763 770 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 GRB14Q14449 540 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 PRPF38BQ5VTL8 546 aaKnown RBP12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 SLF1Q9BQI6 1058 aa12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 RAVER2Q9HCJ3 691 aaKnown RBP12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
NCKIPSD-202ENST00000413374 BRCA2P51587 3418 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 ZNF213O14771 459 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 ZBED4O75132 1171 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 FARP2O94887 1054 aaPredicted RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 PGK2P07205 417 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 BMP3P12645 472 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 MFAP1P55081 439 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 SNAP25P60880 206 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 MFSD14CQ5VZR4 134 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 PRPF38AQ8NAV1 312 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 SHCBP1Q8NEM2 672 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 PAWRQ96IZ0 340 aaKnown RBP12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 MMP19Q99542 508 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 MROH8Q9H579 483 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 ADAMTS5Q9UNA0 930 aa12.05□□□□□ -0.48
NCKIPSD-202ENST00000413374 HIP1O00291 1037 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 STRNO43815 780 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 ORC4O43929 436 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 SLC25A27O95847 323 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 FCER1AP12319 257 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 SLC1A4P43007 532 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 MAP3K21Q5TCX8 1036 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 MFSD6Q6ZSS7 791 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 KCTD1Q719H9 257 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 RASGRP2Q7LDG7 609 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 TICAM2Q86XR7 235 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 TBC1D10CQ8IV04 446 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 GMCL1P1Q8NEA9 526 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 REPS2Q8NFH8 660 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 IL25Q9H293 177 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 RIPK3Q9Y572 518 aa12.04□□□□□ -0.48
NCKIPSD-202ENST00000413374 FGRP09769 529 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 AKNAD1Q5T1N1 836 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 ANO1Q5XXA6 986 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 SKAP1Q86WV1 359 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 TRPV1Q8NER1 839 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 ZNF214Q9UL59 606 aaPredicted RBP12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 MYH7P12883 1935 aa12.03□□□□□ -0.48
NCKIPSD-202ENST00000413374 H0YGN5 161 aa12.02□□□□□ -0.49
NCKIPSD-202ENST00000413374 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms