RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 STX10O60499 249 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 TXLNAP40222 546 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 GPSM2P81274 684 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 GRIK5Q16478 980 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 ARID3AQ99856 593 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 BAG1Q99933 345 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 RTFDC1Q9BY42 306 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 ZNF215Q9UL58 517 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 SYNRGQ9UMZ2 1314 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 CASP1P29466 404 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 KLHL10Q6JEL2 608 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 GJD4Q96KN9 370 aaPredicted RBP13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 STX8Q9UNK0 236 aa13.03□□□□□ -0.32
TRAFD1-202ENST00000412615 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 UFL1O94874 794 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 PLCG2P16885 1265 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 ST5P78524 1137 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 IL17AQ16552 155 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 PTPN21Q16825 1174 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 TMEM139Q8IV31 216 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 MAPKAPK5Q8IW41 473 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.328e-6■■□□□ 13.6
TRAFD1-202ENST00000412615 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 GGA1Q9UJY5 639 aa13.02□□□□□ -0.32
TRAFD1-202ENST00000412615 LY75O60449 1722 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 IL1R1P14778 569 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 RASA1P20936 1047 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 BTDP43251 543 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 GOLGA8FQ08AF8 430 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 GOLGA8DPQ0D2H9 430 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 C4orf32Q8N8J7 132 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 TC2NQ8N9U0 490 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 DAGLBQ8NCG7 672 aa13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 GPR101Q96P66 508 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-202ENST00000412615 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 ADAMTS3O15072 1205 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 BBOX1O75936 387 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 STX17P56962 302 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 FILIP1LQ4L180 1135 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 CDKAL1Q5VV42 579 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 SLC44A5Q8NCS7 719 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 RMND1Q9NWS8 449 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 SAP30BPQ9UHR5 308 aaKnown RBP13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 PHLPP2Q6ZVD8 1323 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 M0R2N6 131 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 SERPINB2P05120 415 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 NAA30Q147X3 362 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 STAMQ92783 540 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 BARHL2Q9NY43 387 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 FAM205AQ6ZU69 1335 aa13.01□□□□□ -0.33
TRAFD1-202ENST00000412615 CDK8P49336 464 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 ADKP55263 362 aaKnown RBP13□□□□□ -0.33
TRAFD1-202ENST00000412615 WWC2Q6AWC2 1192 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 TYW1BQ6NUM6 668 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 C16orf86Q6ZW13 317 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 APTXQ7Z2E3 356 aaKnown RBP13□□□□□ -0.33
TRAFD1-202ENST00000412615 HEATR3Q7Z4Q2 680 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 TEX11Q8IYF3 940 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
TRAFD1-202ENST00000412615 EYA3Q99504 573 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 DNAI1Q9UI46 699 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 PCDHA6Q9UN73 950 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 PPP2R2CQ9Y2T4 447 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 PCDHA8Q9Y5H6 950 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 CYTH3O43739 400 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 GYS1P13807 737 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 RRAGBQ5VZM2 374 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 SMYD4Q8IYR2 804 aaPredicted RBP13□□□□□ -0.33
TRAFD1-202ENST00000412615 NEDD1Q8NHV4 660 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 RASGRP4Q8TDF6 673 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 FEZ1Q99689 392 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 ADD3Q9UEY8 706 aaKnown RBP13□□□□□ -0.33
TRAFD1-202ENST00000412615 SBF2Q86WG5 1849 aa13□□□□□ -0.33
TRAFD1-202ENST00000412615 AKR1B15C9JRZ8 316 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms