RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 USP17L22D6RA61 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L17D6RBQ6 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L19D6RCP7 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L20D6RJB6 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L24Q0WX57 530 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 GSE1Q14687 1217 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 INF2Q27J81 1249 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 SULF1Q8IWU6 871 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 AGBL3Q8NEM8 1001 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 GPRC5DQ9NZD1 345 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 PCDHB6Q9Y5E3 794 aa11.2□□□□□ -0.62
SMPD4-203ENST00000412570 FMNL1O95466 1100 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-203ENST00000412570 PDHBP11177 359 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 IFNAR1P17181 557 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-203ENST00000412570 LEO1Q8WVC0 666 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-203ENST00000412570 DEXIO95424 95 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 WWC2Q6AWC2 1192 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-203ENST00000412570 FAM151AQ8WW52 585 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 DACT1Q9NYF0 836 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 LAMA4Q16363 1823 aa11.19□□□□□ -0.62
SMPD4-203ENST00000412570 MARCH6O60337 910 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 NDUFB10O96000 172 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 MTMR2Q13614 643 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
SMPD4-203ENST00000412570 SUGT1Q9Y2Z0 365 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 A0A1B0GUL6 1792 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 SCG2P13521 617 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 HMGCS2P54868 508 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 PKN1Q16512 942 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 CCDC88AQ3V6T2 1871 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 ADGRF4Q8IZF3 695 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 CLMNQ96JQ2 1002 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 DHX36Q9H2U1 1008 aaKnown RBP11.18□□□□□ -0.62
SMPD4-203ENST00000412570 RRAGCQ9HB90 399 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 FZD9O00144 591 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 GABPAQ06546 454 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 MYSM1Q5VVJ2 828 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 DGKHQ86XP1 1220 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 FSIP1Q8NA03 581 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 RRP36Q96EU6 259 aaKnown RBP11.18□□□□□ -0.62
SMPD4-203ENST00000412570 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-203ENST00000412570 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
SMPD4-203ENST00000412570 CFBP00751 764 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 XBP1P17861 261 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 HSP90AA4PQ58FG1 418 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 GAS2L3Q86XJ1 694 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 CCAR1Q8IX12 1150 aaKnown RBP11.17□□□□□ -0.62
SMPD4-203ENST00000412570 OTUD5Q96G74 571 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 LLPHQ9BRT6 129 aaKnown RBP11.17□□□□□ -0.62
SMPD4-203ENST00000412570 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 CNTNAP1P78357 1384 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 CNTNAP5Q8WYK1 1306 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 SNED1Q8TER0 1413 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 NR1I2O75469 434 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 CREBRFQ8IUR6 639 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 TBC1D5Q92609 795 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 IDI2Q9BXS1 227 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 CCDC194A0A1B0GVG4 234 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-203ENST00000412570 KANSL2Q9H9L4 492 aa11.17□□□□□ -0.62
SMPD4-203ENST00000412570 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 CASP1P29466 404 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 NMRK2Q9NPI5 230 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 FLOT1O75955 427 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 SIAH1Q8IUQ4 282 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 GRAMD1CQ8IYS0 662 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
SMPD4-203ENST00000412570 SDF4Q9BRK5 362 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 POLD4Q9HCU8 107 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 COBLO75128 1261 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 MMP1P03956 469 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 KRT2P35908 639 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 PICK1Q9NRD5 415 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
SMPD4-203ENST00000412570 DDAH1O94760 285 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 CALM1P0DP23 149 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 CALM2P0DP24 149 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 CALM3P0DP25 149 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 EPHX2P34913 555 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 SP4Q02446 784 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 ZSCAN23Q3MJ62 389 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 NOSTRINQ8IVI9 506 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 GPC2Q8N158 579 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-203ENST00000412570 SWAP70Q9UH65 585 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 TMEM179Q6ZVK1 233 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 ZNF396Q96N95 335 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-203ENST00000412570 BRMS1Q9HCU9 246 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 PCDHA7Q9UN72 937 aa11.15□□□□□ -0.62
SMPD4-203ENST00000412570 SPTLC2O15270 562 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms