RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 IL25Q9H293 177 aa22.33■■□□□ 1.17
TRIM56-202ENST00000412507 CWC22Q9HCG8 908 aaKnown RBP22.33■■□□□ 1.17
TRIM56-202ENST00000412507 UBXN2AP68543 259 aa22.32■■□□□ 1.16
TRIM56-202ENST00000412507 WDR78Q5VTH9 848 aa22.32■■□□□ 1.16
TRIM56-202ENST00000412507 NUDT12Q9BQG2 462 aa22.32■■□□□ 1.16
TRIM56-202ENST00000412507 NBPF3Q9H094 633 aa22.32■■□□□ 1.16
TRIM56-202ENST00000412507 IL17RBQ9NRM6 502 aa22.32■■□□□ 1.16
TRIM56-202ENST00000412507 NMT2O60551 498 aa22.31■■□□□ 1.16
TRIM56-202ENST00000412507 CYP2B6P20813 491 aa22.31■■□□□ 1.16
TRIM56-202ENST00000412507 MB21D1Q8N884 522 aa22.31■■□□□ 1.16
TRIM56-202ENST00000412507 BRCA2P51587 3418 aa22.31■■□□□ 1.16
TRIM56-202ENST00000412507 ZNF236Q9UL36 1845 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 INHAP05111 366 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 EN2P19622 333 aaPredicted RBP22.3■■□□□ 1.16
TRIM56-202ENST00000412507 CHMLP26374 656 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 PLS1Q14651 629 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 AKNAD1Q5T1N1 836 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 SKAP1Q86WV1 359 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 TBC1D10CQ8IV04 446 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 SOCS4Q8WXH5 440 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 DSCC1Q9BVC3 393 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 MOV10L1Q9BXT6 1211 aaKnown RBP22.3■■□□□ 1.16
TRIM56-202ENST00000412507 SPATC1LQ9H0A9 340 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 PPP1R9AQ9ULJ8 1098 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 SYNPO2Q9UMS6 1093 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 STX8Q9UNK0 236 aa22.3■■□□□ 1.16
TRIM56-202ENST00000412507 ZNF213O14771 459 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 CCL5P13501 91 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 MORN1Q5T089 497 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 SLFN13Q68D06 897 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 MFSD6Q6ZSS7 791 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 GMCL1P1Q8NEA9 526 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 STAG1Q8WVM7 1258 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 USP6NLQ92738 828 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 ADAMTS5Q9UNA0 930 aa22.29■■□□□ 1.16
TRIM56-202ENST00000412507 SMCHD1A6NHR9 2005 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 TMEM132BQ14DG7 1078 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 PPP4R3BQ5MIZ7 849 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 RUFY2Q8WXA3 655 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 SLF1Q9BQI6 1058 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 RNF208Q9H0X6 261 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 RAD50Q92878 1312 aa22.28■■□□□ 1.16
TRIM56-202ENST00000412507 ERCC3P19447 782 aa22.27■■□□□ 1.16
TRIM56-202ENST00000412507 PTPREP23469 700 aa22.27■■□□□ 1.16
TRIM56-202ENST00000412507 RGS2P41220 211 aa22.27■■□□□ 1.16
TRIM56-202ENST00000412507 NKX2-3Q8TAU0 364 aa22.27■■□□□ 1.16
TRIM56-202ENST00000412507 TRIB2Q92519 343 aa22.27■■□□□ 1.16
TRIM56-202ENST00000412507 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
TRIM56-202ENST00000412507 IVNS1ABPQ9Y6Y0 642 aa22.27■■□□□ 1.16
TRIM56-202ENST00000412507 SLC15A5A6NIM6 579 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 VWA5AO00534 786 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 HMGCRP04035 888 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 PCP11498 1178 aaKnown RBP22.26■■□□□ 1.15
TRIM56-202ENST00000412507 BMP3P12645 472 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 TRIM32Q13049 653 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 MAP2K5Q13163 448 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 SHCBP1Q8NEM2 672 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 FRMPD3Q5JV73 1810 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 NEDD4P46934 1319 aa22.26■■□□□ 1.15
TRIM56-202ENST00000412507 XRCC5P13010 732 aaKnown RBP22.25■■□□□ 1.15
TRIM56-202ENST00000412507 NOVP48745 357 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 GRB14Q14449 540 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 CCL14Q16627 93 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 IMMTQ16891 758 aaKnown RBP22.25■■□□□ 1.15
TRIM56-202ENST00000412507 NCAPG2Q86XI2 1143 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 PRPF38AQ8NAV1 312 aaKnown RBP22.25■■□□□ 1.15
TRIM56-202ENST00000412507 REPS2Q8NFH8 660 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 TCP11L1Q9NUJ3 509 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 CTNNA3Q9UI47 895 aa22.25■■□□□ 1.15
TRIM56-202ENST00000412507 ISY1Q9ULR0 285 aaKnown RBP22.25■■□□□ 1.15
TRIM56-202ENST00000412507 MYH6P13533 1939 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 GJB1P08034 283 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 MCCP23508 829 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 KIFC2Q96AC6 838 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 APBA2Q99767 749 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 MROH8Q9H579 483 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 FEM1BQ9UK73 627 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 ZNF214Q9UL59 606 aaPredicted RBP22.24■■□□□ 1.15
TRIM56-202ENST00000412507 MTMR7Q9Y216 660 aa22.24■■□□□ 1.15
TRIM56-202ENST00000412507 TMEM232C9JQI7 657 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 SGSM2O43147 1006 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 NEFLP07196 543 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
TRIM56-202ENST00000412507 STAT3P40763 770 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 SLC1A4P43007 532 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 PTH1RQ03431 593 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 RASGRP2Q7LDG7 609 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 ESR2Q92731 530 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 GMCL1Q96IK5 515 aa22.23■■□□□ 1.15
TRIM56-202ENST00000412507 STRNO43815 780 aa22.22■■□□□ 1.15
TRIM56-202ENST00000412507 SLC25A27O95847 323 aa22.22■■□□□ 1.15
TRIM56-202ENST00000412507 RIOX2Q8IUF8 465 aa22.22■■□□□ 1.15
TRIM56-202ENST00000412507 TRMT44Q8IYL2 757 aaKnown RBP22.22■■□□□ 1.15
TRIM56-202ENST00000412507 NPLOC4Q8TAT6 608 aa22.22■■□□□ 1.15
TRIM56-202ENST00000412507 SHISA4Q96DD7 197 aa22.22■■□□□ 1.15
TRIM56-202ENST00000412507 TMEM47Q9BQJ4 181 aa22.22■■□□□ 1.15
TRIM56-202ENST00000412507 ZKSCAN3Q9BRR0 538 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms