RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
LINC00342-201ENST00000412393 ERICH6BQ5W0A0 696 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 C2CD4AQ8NCU7 369 aaPredicted RBP7.02□□□□□ -1.29
LINC00342-201ENST00000412393 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 YTHDC1Q96MU7 727 aaKnown RBP7.02□□□□□ -1.29
LINC00342-201ENST00000412393 SYT17Q9BSW7 474 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 ASAP1Q9ULH1 1129 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 MYH14Q7Z406 1995 aaKnown RBP7.02□□□□□ -1.29
LINC00342-201ENST00000412393 KDM6AO15550 1401 aaPredicted RBP7.01□□□□□ -1.29
LINC00342-201ENST00000412393 MAP3K5Q99683 1374 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 DIAPH1O60610 1272 aaKnown RBP7.01□□□□□ -1.29
LINC00342-201ENST00000412393 HMOX1P09601 288 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 RFX1P22670 979 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 ADMP35318 185 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 PLCL1Q15111 1095 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 FAM26DQ5JW98 314 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 KSR1Q8IVT5 923 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 TMEM40Q8WWA1 233 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 GATA6Q92908 595 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 SLC38A3Q99624 504 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 USP26Q9BXU7 913 aa7.01□□□□□ -1.29
LINC00342-201ENST00000412393 ZC3H7BQ9UGR2 993 aaKnown RBP7.01□□□□□ -1.29
LINC00342-201ENST00000412393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
LINC00342-201ENST00000412393 COL3A1P02461 1466 aaPredicted RBP7□□□□□ -1.29
LINC00342-201ENST00000412393 SOX1O00570 391 aaPredicted RBP7□□□□□ -1.29
LINC00342-201ENST00000412393 PCSK2P16519 638 aa7□□□□□ -1.29
LINC00342-201ENST00000412393 ITPK1Q13572 414 aa7□□□□□ -1.29
LINC00342-201ENST00000412393 LINC00116Q8NCU8 138 aa7□□□□□ -1.29
LINC00342-201ENST00000412393 BCL7CQ8WUZ0 217 aaPredicted RBP7□□□□□ -1.29
LINC00342-201ENST00000412393 PRIMPOLQ96LW4 560 aa7□□□□□ -1.29
LINC00342-201ENST00000412393 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
LINC00342-201ENST00000412393 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
LINC00342-201ENST00000412393 NOVA2Q9UNW9 492 aaKnown RBP7□□□□□ -1.29
LINC00342-201ENST00000412393 FAM170BA6NMN3 283 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 U2SURPO15042 1029 aaKnown RBP6.99□□□□□ -1.29
LINC00342-201ENST00000412393 YY1P25490 414 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 SSFA2P28290 1259 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 ELOAQ14241 798 aaKnown RBP6.99□□□□□ -1.29
LINC00342-201ENST00000412393 ZNF792Q3KQV3 632 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 SMIM5Q71RC9 77 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 AMIGO3Q86WK7 504 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 ADAMTS7Q9UKP4 1686 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 FANCIQ9NVI1 1328 aa6.99□□□□□ -1.29
LINC00342-201ENST00000412393 TJP1Q07157 1748 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
LINC00342-201ENST00000412393 PRMT3O60678 531 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 DRD2P14416 443 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 ZNF124Q15973 351 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 MTHFSDQ2M296 383 aaKnown RBP6.98□□□□□ -1.29
LINC00342-201ENST00000412393 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 SHISA5Q8N114 240 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 CFAP53Q96M91 514 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 CXXC1Q9P0U4 656 aaPredicted RBP6.98□□□□□ -1.29
LINC00342-201ENST00000412393 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 C4AP0C0L4 1744 aa6.98□□□□□ -1.29
LINC00342-201ENST00000412393 CICQ96RK0 1608 aaPredicted RBP6.98□□□□□ -1.29
LINC00342-201ENST00000412393 RNMTO43148 476 aaKnown RBP6.97□□□□□ -1.29
LINC00342-201ENST00000412393 PPP2R1AP30153 589 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 GPR162Q16538 588 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 NLGN2Q8NFZ4 835 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 SLC52A2Q9HAB3 445 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 LGR6Q9HBX8 967 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
LINC00342-201ENST00000412393 UBR2Q8IWV8 1755 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 MRC1P22897 1456 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 CNTNAP4Q9C0A0 1308 aa6.97□□□□□ -1.29
LINC00342-201ENST00000412393 DLG5Q8TDM6 1919 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 RPS6KA4O75676 772 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 ADH5P11766 374 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 ZNF765Q7L2R6 523 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 TTC16Q8NEE8 873 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 FAM168AQ92567 244 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 BHLHE41Q9C0J9 482 aaPredicted RBP6.96□□□□□ -1.3
LINC00342-201ENST00000412393 LRRC4CQ9HCJ2 640 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 NUDCQ9Y266 331 aa6.96□□□□□ -1.3
LINC00342-201ENST00000412393 KIF13BQ9NQT8 1826 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 GNAT3A8MTJ3 354 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 DLGAP3O95886 979 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 EDN3P14138 238 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 PRKAR2BP31323 418 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 RFC4P35249 363 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 CRKLP46109 303 aaKnown RBP6.95□□□□□ -1.3
LINC00342-201ENST00000412393 SLC39A6Q13433 755 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 CYP27C1Q4G0S4 372 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 HGSNATQ68CP4 663 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 C1orf127Q8N9H9 656 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 FAM84AQ96KN4 292 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 OSMRQ99650 979 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
LINC00342-201ENST00000412393 N4BP2Q86UW6 1770 aaPredicted RBP6.95□□□□□ -1.3
LINC00342-201ENST00000412393 ZBTB39O15060 712 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 MMP10P09238 476 aa6.94□□□□□ -1.3
LINC00342-201ENST00000412393 U2AF1L5P0DN76 240 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms