RNA–Protein interactions for RNA: ENST00000412237.6

LYRM2-201, Transcript of LYR motif containing 2, humanhuman

TSL 1 (best)

Gene LYRM2, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-201ENST00000412237 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 MYH4Q9Y623 1939 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 GH2P01242 217 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 JAG1P78504 1218 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
LYRM2-201ENST00000412237 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 BRAPQ7Z569 592 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 MTERF4Q7Z6M4 381 aaKnown RBP13.03□□□□□ -0.32
LYRM2-201ENST00000412237 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
LYRM2-201ENST00000412237 CABP5Q9NP86 173 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 GPRC5DQ9NZD1 345 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 VPS54Q9P1Q0 977 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 NYAP2Q9P242 653 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
LYRM2-201ENST00000412237 BAZ2BQ9UIF8 2168 aaKnown RBP13.02□□□□□ -0.32
LYRM2-201ENST00000412237 MMP1P03956 469 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 PDHBP11177 359 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.32
LYRM2-201ENST00000412237 XBP1P17861 261 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 TNFAIP1Q13829 316 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.32
LYRM2-201ENST00000412237 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 MIGA2Q7L4E1 593 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 SHISA4Q96DD7 197 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 SPATA32Q96LK8 384 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 SCAND2PQ9GZW5 306 aaPredicted RBP13.02□□□□□ -0.32
LYRM2-201ENST00000412237 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 CFAP45Q9UL16 551 aa13.02□□□□□ -0.32
LYRM2-201ENST00000412237 FRMPD2Q68DX3 1309 aaPredicted RBP13.02□□□□□ -0.33
LYRM2-201ENST00000412237 CYTH3O43739 400 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 TBC1D12O60347 775 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 SCG2P13521 617 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 ICA1Q05084 483 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 PFKFB3Q16875 520 aaPredicted RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 C9orf131Q5VYM1 1079 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 SIAH1Q8IUQ4 282 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 LEO1Q8WVC0 666 aaPredicted RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 GOLGB1Q14789 3259 aaKnown RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 DDNO94850 711 aaPredicted RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 EPS15P42566 896 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 DIS3L2Q8IYB7 885 aaKnown RBP13.01□□□□□ -0.33
LYRM2-201ENST00000412237 MKL1Q969V6 931 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
LYRM2-201ENST00000412237 ELP1O95163 1332 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 BTBD18B2RXH4 712 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 SNHG28P0DPA3 235 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 VEGFAP15692 232 aaPredicted RBP13□□□□□ -0.33
LYRM2-201ENST00000412237 U2AF2P26368 475 aaKnown RBP eCLIP13□□□□□ -0.33
LYRM2-201ENST00000412237 CCDC96Q2M329 555 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 RNF214Q8ND24 703 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 TEPSINQ96N21 525 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 PHF20Q9BVI0 1012 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 RAD21O60216 631 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 SMARCA1P28370 1054 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 ZNF543Q08ER8 600 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 OXER1Q8TDS5 423 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
LYRM2-201ENST00000412237 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
LYRM2-201ENST00000412237 MAP3K10Q02779 954 aa12.99□□□□□ -0.33
LYRM2-201ENST00000412237 GPR162Q16538 588 aa12.99□□□□□ -0.33
LYRM2-201ENST00000412237 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
LYRM2-201ENST00000412237 SLFN13Q68D06 897 aa12.99□□□□□ -0.33
LYRM2-201ENST00000412237 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
LYRM2-201ENST00000412237 FOXP1Q9H334 677 aaPredicted RBP12.99□□□□□ -0.33
LYRM2-201ENST00000412237 RCOR1Q9UKL0 485 aa12.99□□□□□ -0.33
LYRM2-201ENST00000412237 ZBTB21Q9ULJ3 1066 aa12.99□□□□□ -0.33
LYRM2-201ENST00000412237 KRT2P35908 639 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 HIRAP54198 1017 aaPredicted RBP12.98□□□□□ -0.33
LYRM2-201ENST00000412237 NLRP5P59047 1200 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 NR5A1Q13285 461 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
LYRM2-201ENST00000412237 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
LYRM2-201ENST00000412237 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
LYRM2-201ENST00000412237 CAP2P40123 477 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 GPATCH4Q5T3I0 446 aaKnown RBP12.98□□□□□ -0.33
LYRM2-201ENST00000412237 WWC2Q6AWC2 1192 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 KCTD1Q719H9 257 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 HEATR3Q7Z4Q2 680 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 PIGSQ96S52 555 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 RIOX1Q9H6W3 641 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 ARHGEF10LQ9HCE6 1279 aa12.98□□□□□ -0.33
LYRM2-201ENST00000412237 SH3GLB2Q9NR46 395 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms