RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 IVNS1ABPQ9Y6Y0 642 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 H0YGN5 161 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 ERCC3P19447 782 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 PPARAQ07869 468 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 FAM83BQ5T0W9 1011 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 DIS3LQ8TF46 1054 aaKnown RBP12.09□□□□□ -0.47
LINC01643-201ENST00000412218 IPO9Q96P70 1041 aaKnown RBP12.09□□□□□ -0.47
LINC01643-201ENST00000412218 FBXO28Q9NVF7 368 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 FLRT1Q9NZU1 646 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
LINC01643-201ENST00000412218 STRNO43815 780 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 NDUFB10O96000 172 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 IGHA2P01877 340 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 CCND3P30281 292 aaPredicted RBP12.08□□□□□ -0.48
LINC01643-201ENST00000412218 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
LINC01643-201ENST00000412218 PDE4BQ07343 736 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
LINC01643-201ENST00000412218 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
LINC01643-201ENST00000412218 NPLOC4Q8TAT6 608 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 DPF3Q92784 378 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 CEP95Q96GE4 821 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 MROH8Q9H579 483 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 HELLSQ9NRZ9 838 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
LINC01643-201ENST00000412218 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 F5H6K3 240 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 VWA5AO00534 786 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 RAD21O60216 631 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
LINC01643-201ENST00000412218 ADORA2AP29274 412 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 NUCB1Q02818 461 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 KLRC3Q07444 240 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 PLS1Q14651 629 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 VPS53Q5VIR6 699 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 MFSD14CQ5VZR4 134 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 CHD1LQ86WJ1 897 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 NCAPG2Q86XI2 1143 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 ABRAQ8N0Z2 381 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 REPS2Q8NFH8 660 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 NEDD1Q8NHV4 660 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 MKL1Q969V6 931 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 PAWRQ96IZ0 340 aaKnown RBP12.07□□□□□ -0.48
LINC01643-201ENST00000412218 FAM227BQ96M60 508 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 NUP88Q99567 741 aaPredicted RBP12.07□□□□□ -0.48
LINC01643-201ENST00000412218 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
LINC01643-201ENST00000412218 SLC25A27O95847 323 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 TTLL1O95922 423 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 TSPY3P0CV98 308 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 TSPY8P0CW00 308 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 FAM47AQ5JRC9 791 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 HABP4Q5JVS0 413 aaKnown RBP12.06□□□□□ -0.48
LINC01643-201ENST00000412218 OLFML2BQ68BL8 750 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 LHX8Q68G74 356 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 NECAB2Q7Z6G3 386 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 SLF1Q9BQI6 1058 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
LINC01643-201ENST00000412218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC01643-201ENST00000412218 DOCK3Q8IZD9 2030 aa12.06□□□□□ -0.48
LINC01643-201ENST00000412218 KIAA0100Q14667 2235 aaKnown RBP12.06□□□□□ -0.48
LINC01643-201ENST00000412218 COBLO75128 1261 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 CYP2C19P33261 490 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 TFAP4Q01664 338 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
LINC01643-201ENST00000412218 ALX1Q15699 326 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 MCMDC2Q4G0Z9 681 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 PLEKHM2Q8IWE5 1019 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
LINC01643-201ENST00000412218 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 C11orf49Q9H6J7 331 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 ANAPC4Q9UJX5 808 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
LINC01643-201ENST00000412218 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 ZMYM6O95789 1325 aa12.05□□□□□ -0.48
LINC01643-201ENST00000412218 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 FCER1AP12319 257 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 CYBAP13498 195 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 COPB2P35606 906 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 STAT3P40763 770 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 ZNF589Q86UQ0 364 aaPredicted RBP12.04□□□□□ -0.48
LINC01643-201ENST00000412218 TRPV1Q8NER1 839 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 RILPL2Q969X0 211 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 MMP19Q99542 508 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 SLC5A4Q9NY91 659 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 DDX20Q9UHI6 824 aaKnown RBP12.04□□□□□ -0.48
LINC01643-201ENST00000412218 NR2E3Q9Y5X4 410 aa12.04□□□□□ -0.48
LINC01643-201ENST00000412218 PFASO15067 1338 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms